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Comparative analysis of differentially abundant proteins quantified by LC-MS/MS between flash frozen and laser microdissected OCT-embedded breast tumor samples.
Sturtz LA, Wang G, Shah P, Searfoss R, Raj-Kumar PK, Hooke JA, Fantacone-Campbell JL, Deyarmin B, Cutler ML, Sarangarajan R, Narain NR, Hu H, Kiebish MA, Kovatich AJ, Shriver CD. Sturtz LA, et al. Among authors: raj kumar pk. Clin Proteomics. 2020 Nov 7;17(1):40. doi: 10.1186/s12014-020-09300-y. Clin Proteomics. 2020. PMID: 33292179 Free PMC article.
Development and validation of prognostic gene signature for basal-like breast cancer and high-grade serous ovarian cancer.
Zhang Y, Liu J, Raj-Kumar PK, Sturtz LA, Praveen-Kumar A, Yang HH, Lee MP, Fantacone-Campbell JL, Hooke JA, Kovatich AJ, Shriver CD, Hu H. Zhang Y, et al. Among authors: raj kumar pk. Breast Cancer Res Treat. 2020 Dec;184(3):689-698. doi: 10.1007/s10549-020-05884-z. Epub 2020 Sep 2. Breast Cancer Res Treat. 2020. PMID: 32880016 Free PMC article.
Proteogenomic characterization of difficult-to-treat breast cancer with tumor cells enriched through laser microdissection.
Raj-Kumar PK, Lin X, Liu T, Sturtz LA, Gritsenko MA, Petyuk VA, Sagendorf TJ, Deyarmin B, Liu J, Praveen-Kumar A, Wang G, McDermott JE, Shukla AK, Moore RJ, Monroe ME, Webb-Robertson BM, Hooke JA, Fantacone-Campbell L, Mostoller B, Kvecher L, Kane J, Melley J, Somiari S, Soon-Shiong P, Smith RD, Mural RJ, Rodland KD, Shriver CD, Kovatich AJ, Hu H. Raj-Kumar PK, et al. Breast Cancer Res. 2024 May 14;26(1):76. doi: 10.1186/s13058-024-01835-4. Breast Cancer Res. 2024. PMID: 38745208 Free PMC article.
ProteoMixture: A cell type deconvolution tool for bulk tissue proteomic data.
Teng PN, Schaaf JP, Abulez T, Hood BL, Wilson KN, Litzi TJ, Mitchell D, Conrads KA, Hunt AL, Olowu V, Oliver J, Park FS, Edwards M, Chiang A, Wilkerson MD, Raj-Kumar PK, Tarney CM, Darcy KM, Phippen NT, Maxwell GL, Conrads TP, Bateman NW. Teng PN, et al. Among authors: raj kumar pk. iScience. 2024 Feb 12;27(3):109198. doi: 10.1016/j.isci.2024.109198. eCollection 2024 Mar 15. iScience. 2024. PMID: 38439970 Free PMC article.