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Page 1
Proficiency Testing of Metagenomics-Based Detection of Food-Borne Pathogens Using a Complex Artificial Sequencing Dataset.
Höper D, Grützke J, Brinkmann A, Mossong J, Matamoros S, Ellis RJ, Deneke C, Tausch SH, Cuesta I, Monzón S, Juliá M, Petersen TN, Hendriksen RS, Pamp SJ, Leijon M, Hakhverdyan M, Walsh AM, Cotter PD, Chandrasekaran L, Tay MYF, Schlundt J, Sala C, De Cesare A, Nitsche A, Beer M, Wylezich C. Höper D, et al. Among authors: hendriksen rs. Front Microbiol. 2020 Nov 4;11:575377. doi: 10.3389/fmicb.2020.575377. eCollection 2020. Front Microbiol. 2020. PMID: 33250869 Free PMC article.
Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.
Brinkmann A, Andrusch A, Belka A, Wylezich C, Höper D, Pohlmann A, Nordahl Petersen T, Lucas P, Blanchard Y, Papa A, Melidou A, Oude Munnink BB, Matthijnssens J, Deboutte W, Ellis RJ, Hansmann F, Baumgärtner W, van der Vries E, Osterhaus A, Camma C, Mangone I, Lorusso A, Marcacci M, Nunes A, Pinto M, Borges V, Kroneman A, Schmitz D, Corman VM, Drosten C, Jones TC, Hendriksen RS, Aarestrup FM, Koopmans M, Beer M, Nitsche A. Brinkmann A, et al. Among authors: hendriksen rs. J Clin Microbiol. 2019 Jul 26;57(8):e00466-19. doi: 10.1128/JCM.00466-19. Print 2019 Aug. J Clin Microbiol. 2019. PMID: 31167846 Free PMC article.
Metagenomics-Based Proficiency Test of Smoked Salmon Spiked with a Mock Community.
Sala C, Mordhorst H, Grützke J, Brinkmann A, Petersen TN, Poulsen C, Cotter PD, Crispie F, Ellis RJ, Castellani G, Amid C, Hakhverdyan M, Guyader SL, Manfreda G, Mossong J, Nitsche A, Ragimbeau C, Schaeffer J, Schlundt J, Tay MYF, Aarestrup FM, Hendriksen RS, Pamp SJ, De Cesare A. Sala C, et al. Among authors: hendriksen rs. Microorganisms. 2020 Nov 25;8(12):1861. doi: 10.3390/microorganisms8121861. Microorganisms. 2020. PMID: 33255715 Free PMC article.
Whole-Genome Sequencing Analysis of Nontyphoidal Salmonella enterica of Chicken Meat and Human Origin Under Surveillance in Sri Lanka.
Tay MYF, Pathirage S, Chandrasekaran L, Wickramasuriya U, Sadeepanie N, Waidyarathna KDK, Liyanage LDC, Seow KLG, Hendriksen RS, Takeuchi MT, Schlundt J. Tay MYF, et al. Among authors: hendriksen rs. Foodborne Pathog Dis. 2019 Jul;16(7):531-537. doi: 10.1089/fpd.2018.2604. Epub 2019 May 21. Foodborne Pathog Dis. 2019. PMID: 31099590 Free PMC article.
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage.
Hendriksen RS, Munk P, Njage P, van Bunnik B, McNally L, Lukjancenko O, Röder T, Nieuwenhuijse D, Pedersen SK, Kjeldgaard J, Kaas RS, Clausen PTLC, Vogt JK, Leekitcharoenphon P, van de Schans MGM, Zuidema T, de Roda Husman AM, Rasmussen S, Petersen B; Global Sewage Surveillance project consortium; Amid C, Cochrane G, Sicheritz-Ponten T, Schmitt H, Alvarez JRM, Aidara-Kane A, Pamp SJ, Lund O, Hald T, Woolhouse M, Koopmans MP, Vigre H, Petersen TN, Aarestrup FM. Hendriksen RS, et al. Nat Commun. 2019 Mar 8;10(1):1124. doi: 10.1038/s41467-019-08853-3. Nat Commun. 2019. PMID: 30850636 Free PMC article.
Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach.
Hendriksen RS, Lukjancenko O, Munk P, Hjelmsø MH, Verani JR, Ng'eno E, Bigogo G, Kiplangat S, Oumar T, Bergmark L, Röder T, Neatherlin JC, Clayton O, Hald T, Karlsmose S, Pamp SJ, Fields B, Montgomery JM, Aarestrup FM. Hendriksen RS, et al. PLoS One. 2019 Oct 10;14(10):e0222531. doi: 10.1371/journal.pone.0222531. eCollection 2019. PLoS One. 2019. PMID: 31600207 Free PMC article.
Setting a baseline for global urban virome surveillance in sewage.
Nieuwenhuijse DF, Oude Munnink BB, Phan MVT; Global Sewage Surveillance project consortium; Munk P, Venkatakrishnan S, Aarestrup FM, Cotten M, Koopmans MPG. Nieuwenhuijse DF, et al. Sci Rep. 2020 Aug 13;10(1):13748. doi: 10.1038/s41598-020-69869-0. Sci Rep. 2020. PMID: 32792677 Free PMC article.
Author Correction: Setting a baseline for global urban virome surveillance in sewage.
Nieuwenhuijse DF, Oude Munnink BB, Phan MVT; Global Sewage Surveillance project consortium; Munk P, Venkatakrishnan S, Aarestrup FM, Cotten M, Koopmans MPG. Nieuwenhuijse DF, et al. Sci Rep. 2021 Aug 25;11(1):17446. doi: 10.1038/s41598-021-95934-3. Sci Rep. 2021. PMID: 34433858 Free PMC article. No abstract available.
165 results