Choudhary MNK - Search Results

1

Cell-type-specific 3D epigenomes in the developing human cortex.

Song M, Pebworth MP, Yang X, Abnousi A, Fan C, Wen J, Rosen JD, Choudhary MNK, Cui X, Jones IR, Bergenholtz S, Eze UC, Juric I, Li B, Maliskova L, Lee J, Liu W, Pollen AA, Li Y, Wang T, Hu M, Kriegstein AR, Shen Y. Song M, et al. Among authors: choudhary mnk. Nature. 2020 Nov;587(7835):644-649. doi: 10.1038/s41586-020-2825-4. Epub 2020 Oct 14. Nature. 2020. PMID: 33057195 Free PMC article.

2

DoCM: a database of curated mutations in cancer.

Ainscough BJ, Griffith M, Coffman AC, Wagner AH, Kunisaki J, Choudhary MN, McMichael JF, Fulton RS, Wilson RK, Griffith OL, Mardis ER. Ainscough BJ, et al. Nat Methods. 2016 Sep 29;13(10):806-7. doi: 10.1038/nmeth.4000. Nat Methods. 2016. PMID: 27684579 Free PMC article. No abstract available.

3

Functional cis-regulatory modules encoded by mouse-specific endogenous retrovirus.

Sundaram V, Choudhary MN, Pehrsson E, Xing X, Fiore C, Pandey M, Maricque B, Udawatta M, Ngo D, Chen Y, Paguntalan A, Ray T, Hughes A, Cohen BA, Wang T. Sundaram V, et al. Nat Commun. 2017 Mar 28;8:14550. doi: 10.1038/ncomms14550. Nat Commun. 2017. PMID: 28348391 Free PMC article.

4

Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation.

Zhou J, Sears RL, Xing X, Zhang B, Li D, Rockweiler NB, Jang HS, Choudhary MNK, Lee HJ, Lowdon RF, Arand J, Tabers B, Gu CC, Cicero TJ, Wang T. Zhou J, et al. Among authors: choudhary mnk. BMC Genomics. 2017 Sep 12;18(1):724. doi: 10.1186/s12864-017-4115-6. BMC Genomics. 2017. PMID: 28899353 Free PMC article.

5

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions.

Wang Y, Song F, Zhang B, Zhang L, Xu J, Kuang D, Li D, Choudhary MNK, Li Y, Hu M, Hardison R, Wang T, Yue F. Wang Y, et al. Among authors: choudhary mnk. Genome Biol. 2018 Oct 4;19(1):151. doi: 10.1186/s13059-018-1519-9. Genome Biol. 2018. PMID: 30286773 Free PMC article.

6

The epigenomic landscape of transposable elements across normal human development and anatomy.

Pehrsson EC, Choudhary MNK, Sundaram V, Wang T. Pehrsson EC, et al. Among authors: choudhary mnk. Nat Commun. 2019 Dec 10;10(1):5640. doi: 10.1038/s41467-019-13555-x. Nat Commun. 2019. PMID: 31822674 Free PMC article.

7

Co-opted transposons help perpetuate conserved higher-order chromosomal structures.

Choudhary MN, Friedman RZ, Wang JT, Jang HS, Zhuo X, Wang T. Choudhary MN, et al. Genome Biol. 2020 Jan 24;21(1):16. doi: 10.1186/s13059-019-1916-8. Genome Biol. 2020. PMID: 31973766 Free PMC article.

8

Publisher Correction: Co-opted transposons help perpetuate conserved higher-order chromosomal structures.

Choudhary MNK, Friedman RZ, Wang JT, Jang HS, Zhuo X, Wang T. Choudhary MNK, et al. Genome Biol. 2020 Feb 7;21(1):28. doi: 10.1186/s13059-020-1944-4. Genome Biol. 2020. PMID: 32028988 Free PMC article.

9

Exploring the coronavirus pandemic with the WashU Virus Genome Browser.

Flynn JA, Purushotham D, Choudhary MNK, Zhuo X, Fan C, Matt G, Li D, Wang T. Flynn JA, et al. Among authors: choudhary mnk. Nat Genet. 2020 Oct;52(10):986-991. doi: 10.1038/s41588-020-0697-z. Nat Genet. 2020. PMID: 32908257 No abstract available.

10

Author Correction: Exploring the coronavirus pandemic with the WashU Virus Genome Browser.

Flynn JA, Purushotham D, Choudhary MNK, Zhuo X, Fan C, Matt G, Li D, Wang T. Flynn JA, et al. Among authors: choudhary mnk. Nat Genet. 2020 Oct;52(10):1132. doi: 10.1038/s41588-020-00714-w. Nat Genet. 2020. PMID: 32939076 Free PMC article.

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