Zakharov A - Search Results

1

Style transfer with variational autoencoders is a promising approach to RNA-Seq data harmonization and analysis.

Russkikh N, Antonets D, Shtokalo D, Makarov A, Vyatkin Y, Zakharov A, Terentyev E. Russkikh N, et al. Among authors: zakharov a. Bioinformatics. 2020 Dec 22;36(20):5076-5085. doi: 10.1093/bioinformatics/btaa624. Bioinformatics. 2020. PMID: 33026062 Free PMC article.

2

Large-Scale Modeling of Multispecies Acute Toxicity End Points Using Consensus of Multitask Deep Learning Methods.

Jain S, Siramshetty VB, Alves VM, Muratov EN, Kleinstreuer N, Tropsha A, Nicklaus MC, Simeonov A, Zakharov AV. Jain S, et al. Among authors: zakharov av. J Chem Inf Model. 2021 Feb 22;61(2):653-663. doi: 10.1021/acs.jcim.0c01164. Epub 2021 Feb 3. J Chem Inf Model. 2021. PMID: 33533614 Free PMC article.

3

A new approach to radial basis function approximation and its application to QSAR.

Zakharov AV, Peach ML, Sitzmann M, Nicklaus MC. Zakharov AV, et al. J Chem Inf Model. 2014 Mar 24;54(3):713-9. doi: 10.1021/ci400704f. Epub 2014 Feb 28. J Chem Inf Model. 2014. PMID: 24451033 Free PMC article.

4

QSAR modeling of imbalanced high-throughput screening data in PubChem.

Zakharov AV, Peach ML, Sitzmann M, Nicklaus MC. Zakharov AV, et al. J Chem Inf Model. 2014 Mar 24;54(3):705-12. doi: 10.1021/ci400737s. Epub 2014 Feb 28. J Chem Inf Model. 2014. PMID: 24524735 Free PMC article.

5

QSAR Modeling Using Large-Scale Databases: Case Study for HIV-1 Reverse Transcriptase Inhibitors.

Tarasova OA, Urusova AF, Filimonov DA, Nicklaus MC, Zakharov AV, Poroikov VV. Tarasova OA, et al. Among authors: zakharov av. J Chem Inf Model. 2015 Jul 27;55(7):1388-99. doi: 10.1021/acs.jcim.5b00019. Epub 2015 Jun 29. J Chem Inf Model. 2015. PMID: 26046311 Free PMC article.

6

Novel Consensus Architecture To Improve Performance of Large-Scale Multitask Deep Learning QSAR Models.

Zakharov AV, Zhao T, Nguyen DT, Peryea T, Sheils T, Yasgar A, Huang R, Southall N, Simeonov A. Zakharov AV, et al. J Chem Inf Model. 2019 Nov 25;59(11):4613-4624. doi: 10.1021/acs.jcim.9b00526. Epub 2019 Oct 25. J Chem Inf Model. 2019. PMID: 31584270 Free PMC article.

7

SCAM Detective: Accurate Predictor of Small, Colloidally Aggregating Molecules.

Alves VM, Capuzzi SJ, Braga RC, Korn D, Hochuli JE, Bowler KH, Yasgar A, Rai G, Simeonov A, Muratov EN, Zakharov AV, Tropsha A. Alves VM, et al. Among authors: zakharov av. J Chem Inf Model. 2020 Aug 24;60(8):4056-4063. doi: 10.1021/acs.jcim.0c00415. Epub 2020 Aug 2. J Chem Inf Model. 2020. PMID: 32678597

8

Critical Assessment of Artificial Intelligence Methods for Prediction of hERG Channel Inhibition in the "Big Data" Era.

Siramshetty VB, Nguyen DT, Martinez NJ, Southall NT, Simeonov A, Zakharov AV. Siramshetty VB, et al. Among authors: zakharov av. J Chem Inf Model. 2020 Dec 28;60(12):6007-6019. doi: 10.1021/acs.jcim.0c00884. Epub 2020 Dec 1. J Chem Inf Model. 2020. PMID: 33259212

9

Chemical toxicity prediction for major classes of industrial chemicals: Is it possible to develop universal models covering cosmetics, drugs, and pesticides?

Alves VM, Muratov EN, Zakharov A, Muratov NN, Andrade CH, Tropsha A. Alves VM, et al. Among authors: zakharov a. Food Chem Toxicol. 2018 Feb;112:526-534. doi: 10.1016/j.fct.2017.04.008. Epub 2017 Apr 12. Food Chem Toxicol. 2018. PMID: 28412406 Free PMC article.

10

QSAR Modeling and Prediction of Drug-Drug Interactions.

Zakharov AV, Varlamova EV, Lagunin AA, Dmitriev AV, Muratov EN, Fourches D, Kuz'min VE, Poroikov VV, Tropsha A, Nicklaus MC. Zakharov AV, et al. Mol Pharm. 2016 Feb 1;13(2):545-56. doi: 10.1021/acs.molpharmaceut.5b00762. Epub 2016 Jan 5. Mol Pharm. 2016. PMID: 26669717

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