Shah P - Search Results

1

Ribosomal stalk proteins RPLP1 and RPLP2 promote biogenesis of flaviviral and cellular multi-pass transmembrane proteins.

Campos RK, Wijeratne HRS, Shah P, Garcia-Blanco MA, Bradrick SS. Campos RK, et al. Among authors: shah p. Nucleic Acids Res. 2020 Sep 25;48(17):9872-9885. doi: 10.1093/nar/gkaa717. Nucleic Acids Res. 2020. PMID: 32890404 Free PMC article.

2

The LIN28B-IMP1 post-transcriptional regulon has opposing effects on oncogenic signaling in the intestine.

Chatterji P, Hamilton KE, Liang S, Andres SF, Wijeratne HRS, Mizuno R, Simon LA, Hicks PD, Foley SW, Pitarresi JR, Klein-Szanto AJ, Mah AT, Van Landeghem L, Gregory BD, Lengner CJ, Madison BB, Shah P, Rustgi AK. Chatterji P, et al. Among authors: shah p. Genes Dev. 2018 Aug 1;32(15-16):1020-1034. doi: 10.1101/gad.314369.118. Genes Dev. 2018. PMID: 30068703 Free PMC article.

3

Simultaneous Ribosome Profiling of Human Host Cells Infected with Toxoplasma gondii.

Holmes MJ, Shah P, Wek RC, Sullivan WJ Jr. Holmes MJ, et al. Among authors: shah p. mSphere. 2019 Jun 5;4(3):e00292-19. doi: 10.1128/mSphere.00292-19. mSphere. 2019. PMID: 31167946 Free PMC article.

4

O-GlcNAcylation alters the selection of mRNAs for translation and promotes 4E-BP1-dependent mitochondrial dysfunction in the retina.

Dierschke SK, Miller WP, Favate JS, Shah P, Imamura Kawasawa Y, Salzberg AC, Kimball SR, Jefferson LS, Dennis MD. Dierschke SK, et al. Among authors: shah p. J Biol Chem. 2019 Apr 5;294(14):5508-5520. doi: 10.1074/jbc.RA119.007494. Epub 2019 Feb 7. J Biol Chem. 2019. PMID: 30733333 Free PMC article.

5

Exploring Ribosome-Positioning on Translating Transcripts with Ribosome Profiling.

Cope AL, Vellappan S, Favate JS, Skalenko KS, Yadavalli SS, Shah P. Cope AL, et al. Among authors: shah p. Methods Mol Biol. 2022;2404:83-110. doi: 10.1007/978-1-0716-1851-6_5. Methods Mol Biol. 2022. PMID: 34694605

6

NADcapPro and circNC: methods for accurate profiling of NAD and non-canonical RNA caps in eukaryotes.

Sharma S, Yang J, Favate J, Shah P, Kiledjian M. Sharma S, et al. Among authors: shah p. Commun Biol. 2023 Apr 13;6(1):406. doi: 10.1038/s42003-023-04774-6. Commun Biol. 2023. PMID: 37055518 Free PMC article.

7

Rate-limiting steps in yeast protein translation.

Shah P, Ding Y, Niemczyk M, Kudla G, Plotkin JB. Shah P, et al. Cell. 2013 Jun 20;153(7):1589-601. doi: 10.1016/j.cell.2013.05.049. Cell. 2013. PMID: 23791185 Free PMC article.

8

riboviz: analysis and visualization of ribosome profiling datasets.

Carja O, Xing T, Wallace EWJ, Plotkin JB, Shah P. Carja O, et al. Among authors: shah p. BMC Bioinformatics. 2017 Oct 25;18(1):461. doi: 10.1186/s12859-017-1873-8. BMC Bioinformatics. 2017. PMID: 29070028 Free PMC article.

9

Weak 5'-mRNA secondary structures in short eukaryotic genes.

Ding Y, Shah P, Plotkin JB. Ding Y, et al. Among authors: shah p. Genome Biol Evol. 2012;4(10):1046-53. doi: 10.1093/gbe/evs082. Genome Biol Evol. 2012. PMID: 23034215 Free PMC article.

10

Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation.

Weinberg DE, Shah P, Eichhorn SW, Hussmann JA, Plotkin JB, Bartel DP. Weinberg DE, et al. Among authors: shah p. Cell Rep. 2016 Feb 23;14(7):1787-1799. doi: 10.1016/j.celrep.2016.01.043. Epub 2016 Feb 11. Cell Rep. 2016. PMID: 26876183 Free PMC article.

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