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Efficient sample tracking with OpenLabFramework.
List M, Schmidt S, Trojnar J, Thomas J, Thomassen M, Kruse TA, Tan Q, Baumbach J, Mollenhauer J. List M, et al. Sci Rep. 2014 Mar 4;4:4278. doi: 10.1038/srep04278. Sci Rep. 2014. PMID: 24589879 Free PMC article.
On the performance of de novo pathway enrichment.
Batra R, Alcaraz N, Gitzhofer K, Pauling J, Ditzel HJ, Hellmuth M, Baumbach J, List M. Batra R, et al. Among authors: list m. NPJ Syst Biol Appl. 2017 Mar 3;3:6. doi: 10.1038/s41540-017-0007-2. eCollection 2017. NPJ Syst Biol Appl. 2017. PMID: 28649433 Free PMC article.
De novo pathway-based biomarker identification.
Alcaraz N, List M, Batra R, Vandin F, Ditzel HJ, Baumbach J. Alcaraz N, et al. Among authors: list m. Nucleic Acids Res. 2017 Sep 19;45(16):e151. doi: 10.1093/nar/gkx642. Nucleic Acids Res. 2017. PMID: 28934488 Free PMC article.
Mass-spectrometry-based draft of the Arabidopsis proteome.
Mergner J, Frejno M, List M, Papacek M, Chen X, Chaudhary A, Samaras P, Richter S, Shikata H, Messerer M, Lang D, Altmann S, Cyprys P, Zolg DP, Mathieson T, Bantscheff M, Hazarika RR, Schmidt T, Dawid C, Dunkel A, Hofmann T, Sprunck S, Falter-Braun P, Johannes F, Mayer KFX, Jürgens G, Wilhelm M, Baumbach J, Grill E, Schneitz K, Schwechheimer C, Kuster B. Mergner J, et al. Among authors: list m. Nature. 2020 Mar;579(7799):409-414. doi: 10.1038/s41586-020-2094-2. Epub 2020 Mar 11. Nature. 2020. PMID: 32188942
EpiGEN: an epistasis simulation pipeline.
Blumenthal DB, Viola L, List M, Baumbach J, Tieri P, Kacprowski T. Blumenthal DB, et al. Among authors: list m. Bioinformatics. 2020 Dec 8;36(19):4957-4959. doi: 10.1093/bioinformatics/btaa245. Bioinformatics. 2020. PMID: 32289146
Arrhythmic Gut Microbiome Signatures Predict Risk of Type 2 Diabetes.
Reitmeier S, Kiessling S, Clavel T, List M, Almeida EL, Ghosh TS, Neuhaus K, Grallert H, Linseisen J, Skurk T, Brandl B, Breuninger TA, Troll M, Rathmann W, Linkohr B, Hauner H, Laudes M, Franke A, Le Roy CI, Bell JT, Spector T, Baumbach J, O'Toole PW, Peters A, Haller D. Reitmeier S, et al. Among authors: list m. Cell Host Microbe. 2020 Aug 12;28(2):258-272.e6. doi: 10.1016/j.chom.2020.06.004. Epub 2020 Jul 2. Cell Host Microbe. 2020. PMID: 32619440 Free article.
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing.
Sadegh S, Matschinske J, Blumenthal DB, Galindez G, Kacprowski T, List M, Nasirigerdeh R, Oubounyt M, Pichlmair A, Rose TD, Salgado-Albarrán M, Späth J, Stukalov A, Wenke NK, Yuan K, Pauling JK, Baumbach J. Sadegh S, et al. Among authors: list m. Nat Commun. 2020 Jul 14;11(1):3518. doi: 10.1038/s41467-020-17189-2. Nat Commun. 2020. PMID: 32665542 Free PMC article.
241 results