Arkin AP - Search Results

1

Redefining fundamental concepts of transcription initiation in bacteria.

Mejía-Almonte C, Busby SJW, Wade JT, van Helden J, Arkin AP, Stormo GD, Eilbeck K, Palsson BO, Galagan JE, Collado-Vides J. Mejía-Almonte C, et al. Among authors: arkin ap. Nat Rev Genet. 2020 Nov;21(11):699-714. doi: 10.1038/s41576-020-0254-8. Epub 2020 Jul 14. Nat Rev Genet. 2020. PMID: 32665585 Free PMC article. Review.

2

The evolution of genetic regulatory systems in bacteria.

McAdams HH, Srinivasan B, Arkin AP. McAdams HH, et al. Among authors: arkin ap. Nat Rev Genet. 2004 Mar;5(3):169-78. doi: 10.1038/nrg1292. Nat Rev Genet. 2004. PMID: 14970819 Review. No abstract available.

3

Regulation of transcription by unnatural amino acids.

Liu CC, Qi L, Yanofsky C, Arkin AP. Liu CC, et al. Among authors: arkin ap. Nat Biotechnol. 2011 Feb;29(2):164-8. doi: 10.1038/nbt.1741. Epub 2011 Jan 16. Nat Biotechnol. 2011. PMID: 21240267

4

RNA processing enables predictable programming of gene expression.

Qi L, Haurwitz RE, Shao W, Doudna JA, Arkin AP. Qi L, et al. Among authors: arkin ap. Nat Biotechnol. 2012 Oct;30(10):1002-6. doi: 10.1038/nbt.2355. Epub 2012 Sep 16. Nat Biotechnol. 2012. PMID: 22983090

5

An adaptor from translational to transcriptional control enables predictable assembly of complex regulation.

Liu CC, Qi L, Lucks JB, Segall-Shapiro TH, Wang D, Mutalik VK, Arkin AP. Liu CC, et al. Among authors: arkin ap. Nat Methods. 2012 Nov;9(11):1088-94. doi: 10.1038/nmeth.2184. Epub 2012 Sep 30. Nat Methods. 2012. PMID: 23023598

6

Precise and reliable gene expression via standard transcription and translation initiation elements.

Mutalik VK, Guimaraes JC, Cambray G, Lam C, Christoffersen MJ, Mai QA, Tran AB, Paull M, Keasling JD, Arkin AP, Endy D. Mutalik VK, et al. Among authors: arkin ap. Nat Methods. 2013 Apr;10(4):354-60. doi: 10.1038/nmeth.2404. Epub 2013 Mar 10. Nat Methods. 2013. PMID: 23474465

7

A versatile framework for microbial engineering using synthetic non-coding RNAs.

Qi LS, Arkin AP. Qi LS, et al. Among authors: arkin ap. Nat Rev Microbiol. 2014 May;12(5):341-54. doi: 10.1038/nrmicro3244. Nat Rev Microbiol. 2014. PMID: 24736794 Review.

8

Operon formation is driven by co-regulation and not by horizontal gene transfer.

Price MN, Huang KH, Arkin AP, Alm EJ. Price MN, et al. Among authors: arkin ap. Genome Res. 2005 Jun;15(6):809-19. doi: 10.1101/gr.3368805. Genome Res. 2005. PMID: 15930492 Free PMC article.

9

Orthologous transcription factors in bacteria have different functions and regulate different genes.

Price MN, Dehal PS, Arkin AP. Price MN, et al. Among authors: arkin ap. PLoS Comput Biol. 2007 Sep;3(9):1739-50. doi: 10.1371/journal.pcbi.0030175. PLoS Comput Biol. 2007. PMID: 17845071 Free PMC article.

10

Evolution, ecology and the engineered organism: lessons for synthetic biology.

Skerker JM, Lucks JB, Arkin AP. Skerker JM, et al. Among authors: arkin ap. Genome Biol. 2009;10(11):114. doi: 10.1186/gb-2009-10-11-114. Epub 2009 Nov 30. Genome Biol. 2009. PMID: 19941672 Free PMC article.

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