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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE).
Waltemath D, Golebiewski M, Blinov ML, Gleeson P, Hermjakob H, Hucka M, Inau ET, Keating SM, König M, Krebs O, Malik-Sheriff RS, Nickerson D, Oberortner E, Sauro HM, Schreiber F, Smith L, Stefan MI, Wittig U, Myers CJ. Waltemath D, et al. Among authors: smith l. J Integr Bioinform. 2020 Jun 29;17(2-3):20200005. doi: 10.1515/jib-2020-0005. J Integr Bioinform. 2020. PMID: 32598315 Free PMC article.
Antimony: a modular model definition language.
Smith LP, Bergmann FT, Chandran D, Sauro HM. Smith LP, et al. Bioinformatics. 2009 Sep 15;25(18):2452-4. doi: 10.1093/bioinformatics/btp401. Epub 2009 Jul 3. Bioinformatics. 2009. PMID: 19578039 Free PMC article.
SBML and CellML translation in antimony and JSim.
Smith LP, Butterworth E, Bassingthwaighte JB, Sauro HM. Smith LP, et al. Bioinformatics. 2014 Apr 1;30(7):903-7. doi: 10.1093/bioinformatics/btt641. Epub 2013 Nov 8. Bioinformatics. 2014. PMID: 24215024 Free PMC article.
A reappraisal of how to build modular, reusable models of biological systems.
Neal ML, Cooling MT, Smith LP, Thompson CT, Sauro HM, Carlson BE, Cook DL, Gennari JH. Neal ML, et al. Among authors: smith lp. PLoS Comput Biol. 2014 Oct 2;10(10):e1003849. doi: 10.1371/journal.pcbi.1003849. eCollection 2014 Oct. PLoS Comput Biol. 2014. PMID: 25275523 Free PMC article. No abstract available.
SBML Level 3 package: Groups, Version 1 Release 1.
Hucka M, Smith LP. Hucka M, et al. J Integr Bioinform. 2016 Dec 18;13(3):290. doi: 10.2390/biecoll-jib-2016-290. J Integr Bioinform. 2016. PMID: 28187406 Free PMC article.
13,264 results
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