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863 genomes reveal the origin and domestication of chicken.
Wang MS, Thakur M, Peng MS, Jiang Y, Frantz LAF, Li M, Zhang JJ, Wang S, Peters J, Otecko NO, Suwannapoom C, Guo X, Zheng ZQ, Esmailizadeh A, Hirimuthugoda NY, Ashari H, Suladari S, Zein MSA, Kusza S, Sohrabi S, Kharrati-Koopaee H, Shen QK, Zeng L, Yang MM, Wu YJ, Yang XY, Lu XM, Jia XZ, Nie QH, Lamont SJ, Lasagna E, Ceccobelli S, Gunwardana HGTN, Senasige TM, Feng SH, Si JF, Zhang H, Jin JQ, Li ML, Liu YH, Chen HM, Ma C, Dai SS, Bhuiyan AKFH, Khan MS, Silva GLLP, Le TT, Mwai OA, Ibrahim MNM, Supple M, Shapiro B, Hanotte O, Zhang G, Larson G, Han JL, Wu DD, Zhang YP. Wang MS, et al. Among authors: supple m. Cell Res. 2020 Aug;30(8):693-701. doi: 10.1038/s41422-020-0349-y. Epub 2020 Jun 25. Cell Res. 2020. PMID: 32581344 Free PMC article.
Integrating gene annotation with orthology inference at scale.
Kirilenko BM, Munegowda C, Osipova E, Jebb D, Sharma V, Blumer M, Morales AE, Ahmed AW, Kontopoulos DG, Hilgers L, Lindblad-Toh K, Karlsson EK; Zoonomia Consortium‡; Hiller M. Kirilenko BM, et al. Science. 2023 Apr 28;380(6643):eabn3107. doi: 10.1126/science.abn3107. Epub 2023 Apr 28. Science. 2023. PMID: 37104600 Free PMC article.
Conservation of biodiversity in the genomics era.
Supple MA, Shapiro B. Supple MA, et al. Genome Biol. 2018 Sep 11;19(1):131. doi: 10.1186/s13059-018-1520-3. Genome Biol. 2018. PMID: 30205843 Free PMC article. Review.
Author Correction: 863 genomes reveal the origin and domestication of chicken.
Wang MS, Thakur M, Peng MS, Jiang Y, Frantz LAF, Li M, Zhang JJ, Wang S, Peters J, Otecko NO, Suwannapoom C, Guo X, Zheng ZQ, Esmailizadeh A, Hirimuthugoda NY, Ashari H, Suladari S, Zein MSA, Kusza S, Sohrabi S, Kharrati-Koopaee H, Shen QK, Zeng L, Yang MM, Wu YJ, Yang XY, Lu XM, Jia XZ, Nie QH, Lamont SJ, Lasagna E, Ceccobelli S, Gunwardana HGTN, Senasige TM, Feng SH, Si JF, Zhang H, Jin JQ, Li ML, Liu YH, Chen HM, Ma C, Dai SS, Bhuiyan AKFH, Khan MS, Silva GLLP, Le TT, Mwai OA, Ibrahim MNM, Supple M, Shapiro B, Hanotte O, Zhang G, Larson G, Han JL, Wu DD, Zhang YP. Wang MS, et al. Among authors: supple m. Cell Res. 2020 Sep;30(9):824-825. doi: 10.1038/s41422-020-0380-z. Cell Res. 2020. PMID: 32690900 Free PMC article.
Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.
Saremi NF, Supple MA, Byrne A, Cahill JA, Coutinho LL, Dalén L, Figueiró HV, Johnson WE, Milne HJ, O'Brien SJ, O'Connell B, Onorato DP, Riley SPD, Sikich JA, Stahler DR, Villela PMS, Vollmers C, Wayne RK, Eizirik E, Corbett-Detig RB, Green RE, Wilmers CC, Shapiro B. Saremi NF, et al. Nat Commun. 2019 Oct 18;10(1):4769. doi: 10.1038/s41467-019-12741-1. Nat Commun. 2019. PMID: 31628318 Free PMC article.
Glacial ice supports a distinct and undocumented polar bear subpopulation persisting in late 21st-century sea-ice conditions.
Laidre KL, Supple MA, Born EW, Regehr EV, Wiig Ø, Ugarte F, Aars J, Dietz R, Sonne C, Hegelund P, Isaksen C, Akse GB, Cohen B, Stern HL, Moon T, Vollmers C, Corbett-Detig R, Paetkau D, Shapiro B. Laidre KL, et al. Science. 2022 Jun 17;376(6599):1333-1338. doi: 10.1126/science.abk2793. Epub 2022 Jun 16. Science. 2022. PMID: 35709290
A chromosome-level genome assembly of the mountain lion, Puma concolor.
Supple MA, Escalona M, Alexandre N, Buchalski MR, Riley SPD, Dellinger JA, Vickers TW, Sahasrabudhe R, Nguyen O, Fairbairn CW, Seligmann WE, Wilmers CC, Shapiro B. Supple MA, et al. J Hered. 2024 Nov 7:esae063. doi: 10.1093/jhered/esae063. Online ahead of print. J Hered. 2024. PMID: 39506490
42 results