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Measles virus and rinderpest virus divergence dated to the sixth century BCE.
Düx A, Lequime S, Patrono LV, Vrancken B, Boral S, Gogarten JF, Hilbig A, Horst D, Merkel K, Prepoint B, Santibanez S, Schlotterbeck J, Suchard MA, Ulrich M, Widulin N, Mankertz A, Leendertz FH, Harper K, Schnalke T, Lemey P, Calvignac-Spencer S. Düx A, et al. Among authors: lequime s. Science. 2020 Jun 19;368(6497):1367-1370. doi: 10.1126/science.aba9411. Science. 2020. PMID: 32554594 Free PMC article.
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework.
Dellicour S, Lequime S, Vrancken B, Gill MS, Bastide P, Gangavarapu K, Matteson NL, Tan Y, du Plessis L, Fisher AA, Nelson MI, Gilbert M, Suchard MA, Andersen KG, Grubaugh ND, Pybus OG, Lemey P. Dellicour S, et al. Among authors: lequime s. Nat Commun. 2020 Nov 6;11(1):5620. doi: 10.1038/s41467-020-19122-z. Nat Commun. 2020. PMID: 33159066 Free PMC article.
Molecular detection and genomic characterization of diverse hepaciviruses in African rodents.
Bletsa M, Vrancken B, Gryseels S, Boonen I, Fikatas A, Li Y, Laudisoit A, Lequime S, Bryja J, Makundi R, Meheretu Y, Akaibe BD, Mbalitini SG, Van de Perre F, Van Houtte N, Těšíková J, Wollants E, Van Ranst M, Pybus OG, Drexler JF, Verheyen E, Leirs H, Gouy de Bellocq J, Lemey P. Bletsa M, et al. Among authors: lequime s. Virus Evol. 2021 Apr 12;7(1):veab036. doi: 10.1093/ve/veab036. eCollection 2021 Jan. Virus Evol. 2021. PMID: 34221451 Free PMC article.
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic.
Patrono LV, Vrancken B, Budt M, Düx A, Lequime S, Boral S, Gilbert MTP, Gogarten JF, Hoffmann L, Horst D, Merkel K, Morens D, Prepoint B, Schlotterbeck J, Schuenemann VJ, Suchard MA, Taubenberger JK, Tenkhoff L, Urban C, Widulin N, Winter E, Worobey M, Schnalke T, Wolff T, Lemey P, Calvignac-Spencer S. Patrono LV, et al. Among authors: lequime s. Nat Commun. 2022 May 10;13(1):2314. doi: 10.1038/s41467-022-29614-9. Nat Commun. 2022. PMID: 35538057 Free PMC article.
Endogenous Viral Elements in Shrew Genomes Provide Insights into Pestivirus Ancient History.
Li Y, Bletsa M, Zisi Z, Boonen I, Gryseels S, Kafetzopoulou L, Webster JP, Catalano S, Pybus OG, Van de Perre F, Li H, Li Y, Li Y, Abramov A, Lymberakis P, Lemey P, Lequime S. Li Y, et al. Among authors: lequime s. Mol Biol Evol. 2022 Oct 7;39(10):msac190. doi: 10.1093/molbev/msac190. Mol Biol Evol. 2022. PMID: 36063436 Free PMC article.
Genomic Epidemiology of 2015-2016 Zika Virus Outbreak in Cape Verde.
Faye O, de Lourdes Monteiro M, Vrancken B, Prot M, Lequime S, Diarra M, Ndiaye O, Valdez T, Tavarez S, Ramos J, da Veiga Leal S, Pires C, Moreira A, Tavares MF, Fernandes L, Barreto JN, do Céu Teixeira M, de Lima Mendonça MDL, Gomes CCDSL, Castellon MS, Ma L, Lemoine F, Gámbaro-Roglia F, Delaune D, Fall G, Fall IS, Diop M, Sakuntabhai A, Loucoubar C, Lemey P, Holmes EC, Faye O, Sall AA, Simon-Loriere E. Faye O, et al. Among authors: lequime s. Emerg Infect Dis. 2020 Jun;26(6):1084-1090. doi: 10.3201/eid2606.190928. Emerg Infect Dis. 2020. PMID: 32441631 Free PMC article.
37 results