Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

256 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Publication Date timeline is not available.
Page 1
Analysis of task-based functional MRI data preprocessed with fMRIPrep.
Esteban O, Ciric R, Finc K, Blair RW, Markiewicz CJ, Moodie CA, Kent JD, Goncalves M, DuPre E, Gomez DEP, Ye Z, Salo T, Valabregue R, Amlien IK, Liem F, Jacoby N, Stojić H, Cieslak M, Urchs S, Halchenko YO, Ghosh SS, De La Vega A, Yarkoni T, Wright J, Thompson WH, Poldrack RA, Gorgolewski KJ. Esteban O, et al. Among authors: cieslak m. Nat Protoc. 2020 Jul;15(7):2186-2202. doi: 10.1038/s41596-020-0327-3. Epub 2020 Jun 8. Nat Protoc. 2020. PMID: 32514178 Free PMC article.
Mitigating head motion artifact in functional connectivity MRI.
Ciric R, Rosen AFG, Erus G, Cieslak M, Adebimpe A, Cook PA, Bassett DS, Davatzikos C, Wolf DH, Satterthwaite TD. Ciric R, et al. Among authors: cieslak m. Nat Protoc. 2018 Dec;13(12):2801-2826. doi: 10.1038/s41596-018-0065-y. Nat Protoc. 2018. PMID: 30446748 Free PMC article.
QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data.
Cieslak M, Cook PA, He X, Yeh FC, Dhollander T, Adebimpe A, Aguirre GK, Bassett DS, Betzel RF, Bourque J, Cabral LM, Davatzikos C, Detre JA, Earl E, Elliott MA, Fadnavis S, Fair DA, Foran W, Fotiadis P, Garyfallidis E, Giesbrecht B, Gur RC, Gur RE, Kelz MB, Keshavan A, Larsen BS, Luna B, Mackey AP, Milham MP, Oathes DJ, Perrone A, Pines AR, Roalf DR, Richie-Halford A, Rokem A, Sydnor VJ, Tapera TM, Tooley UA, Vettel JM, Yeatman JD, Grafton ST, Satterthwaite TD. Cieslak M, et al. Nat Methods. 2021 Jul;18(7):775-778. doi: 10.1038/s41592-021-01185-5. Epub 2021 Jun 21. Nat Methods. 2021. PMID: 34155395 Free PMC article.
ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion.
Adebimpe A, Bertolero M, Dolui S, Cieslak M, Murtha K, Baller EB, Boeve B, Boxer A, Butler ER, Cook P, Colcombe S, Covitz S, Davatzikos C, Davila DG, Elliott MA, Flounders MW, Franco AR, Gur RE, Gur RC, Jaber B, McMillian C; ALLFTD Consortium; Milham M, Mutsaerts HJMM, Oathes DJ, Olm CA, Phillips JS, Tackett W, Roalf DR, Rosen H, Tapera TM, Tisdall MD, Zhou D, Esteban O, Poldrack RA, Detre JA, Satterthwaite TD. Adebimpe A, et al. Among authors: cieslak m. Nat Methods. 2022 Jun;19(6):683-686. doi: 10.1038/s41592-022-01458-7. Epub 2022 Jun 10. Nat Methods. 2022. PMID: 35689029 Free PMC article.
Functional connectivity development along the sensorimotor-association axis enhances the cortical hierarchy.
Luo AC, Sydnor VJ, Pines A, Larsen B, Alexander-Bloch AF, Cieslak M, Covitz S, Chen AA, Esper NB, Feczko E, Franco AR, Gur RE, Gur RC, Houghton A, Hu F, Keller AS, Kiar G, Mehta K, Salum GA, Tapera T, Xu T, Zhao C, Salo T, Fair DA, Shinohara RT, Milham MP, Satterthwaite TD. Luo AC, et al. Among authors: cieslak m. Nat Commun. 2024 Apr 25;15(1):3511. doi: 10.1038/s41467-024-47748-w. Nat Commun. 2024. PMID: 38664387 Free PMC article.
Accelerated cortical thinning within structural brain networks is associated with irritability in youth.
Jirsaraie RJ, Kaczkurkin AN, Rush S, Piiwia K, Adebimpe A, Bassett DS, Bourque J, Calkins ME, Cieslak M, Ciric R, Cook PA, Davila D, Elliott MA, Leibenluft E, Murtha K, Roalf DR, Rosen AFG, Ruparel K, Shinohara RT, Sotiras A, Wolf DH, Davatzikos C, Satterthwaite TD. Jirsaraie RJ, et al. Among authors: cieslak m. Neuropsychopharmacology. 2019 Dec;44(13):2254-2262. doi: 10.1038/s41386-019-0508-3. Epub 2019 Sep 2. Neuropsychopharmacology. 2019. PMID: 31476764 Free PMC article.
Development of structure-function coupling in human brain networks during youth.
Baum GL, Cui Z, Roalf DR, Ciric R, Betzel RF, Larsen B, Cieslak M, Cook PA, Xia CH, Moore TM, Ruparel K, Oathes DJ, Alexander-Bloch AF, Shinohara RT, Raznahan A, Gur RE, Gur RC, Bassett DS, Satterthwaite TD. Baum GL, et al. Among authors: cieslak m. Proc Natl Acad Sci U S A. 2020 Jan 7;117(1):771-778. doi: 10.1073/pnas.1912034117. Epub 2019 Dec 24. Proc Natl Acad Sci U S A. 2020. PMID: 31874926 Free PMC article.
An analysis-ready and quality controlled resource for pediatric brain white-matter research.
Richie-Halford A, Cieslak M, Ai L, Caffarra S, Covitz S, Franco AR, Karipidis II, Kruper J, Milham M, Avelar-Pereira B, Roy E, Sydnor VJ, Yeatman JD; Fibr Community Science Consortium; Satterthwaite TD, Rokem A. Richie-Halford A, et al. Among authors: cieslak m. Sci Data. 2022 Oct 12;9(1):616. doi: 10.1038/s41597-022-01695-7. Sci Data. 2022. PMID: 36224186 Free PMC article.
256 results