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Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology.
Fauver JR, Petrone ME, Hodcroft EB, Shioda K, Ehrlich HY, Watts AG, Vogels CBF, Brito AF, Alpert T, Muyombwe A, Razeq J, Downing R, Cheemarla NR, Wyllie AL, Kalinich CC, Ott I, Quick J, Loman NJ, Neugebauer KM, Greninger AL, Jerome KR, Roychoudhury P, Xie H, Shrestha L, Huang ML, Pitzer VE, Iwasaki A, Omer SB, Khan K, Bogoch II, Martinello RA, Foxman EF, Landry ML, Neher RA, Ko AI, Grubaugh ND. Fauver JR, et al. Among authors: iwasaki a. medRxiv [Preprint]. 2020 Mar 26:2020.03.25.20043828. doi: 10.1101/2020.03.25.20043828. medRxiv. 2020. Update in: Cell. 2020 May 28;181(5):990-996.e5. doi: 10.1016/j.cell.2020.04.021 PMID: 32511630 Free PMC article. Updated. Preprint.
Early local immune defences in the respiratory tract.
Iwasaki A, Foxman EF, Molony RD. Iwasaki A, et al. Nat Rev Immunol. 2017 Jan;17(1):7-20. doi: 10.1038/nri.2016.117. Epub 2016 Nov 28. Nat Rev Immunol. 2017. PMID: 27890913 Free PMC article. Review.
Why does Japan have so few cases of COVID-19?
Iwasaki A, Grubaugh ND. Iwasaki A, et al. EMBO Mol Med. 2020 May 8;12(5):e12481. doi: 10.15252/emmm.202012481. Epub 2020 Apr 28. EMBO Mol Med. 2020. PMID: 32275804 Free PMC article.
Coast-to-Coast Spread of SARS-CoV-2 during the Early Epidemic in the United States.
Fauver JR, Petrone ME, Hodcroft EB, Shioda K, Ehrlich HY, Watts AG, Vogels CBF, Brito AF, Alpert T, Muyombwe A, Razeq J, Downing R, Cheemarla NR, Wyllie AL, Kalinich CC, Ott IM, Quick J, Loman NJ, Neugebauer KM, Greninger AL, Jerome KR, Roychoudhury P, Xie H, Shrestha L, Huang ML, Pitzer VE, Iwasaki A, Omer SB, Khan K, Bogoch II, Martinello RA, Foxman EF, Landry ML, Neher RA, Ko AI, Grubaugh ND. Fauver JR, et al. Among authors: iwasaki a. Cell. 2020 May 28;181(5):990-996.e5. doi: 10.1016/j.cell.2020.04.021. Epub 2020 May 7. Cell. 2020. PMID: 32386545 Free PMC article.
Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium.
Ravindra NG, Alfajaro MM, Gasque V, Habet V, Wei J, Filler RB, Huston NC, Wan H, Szigeti-Buck K, Wang B, Wang G, Montgomery RR, Eisenbarth SC, Williams A, Pyle AM, Iwasaki A, Horvath TL, Foxman EF, Pierce RW, van Dijk D, Wilen CB. Ravindra NG, et al. Among authors: iwasaki a. bioRxiv [Preprint]. 2020 Jul 13:2020.05.06.081695. doi: 10.1101/2020.05.06.081695. bioRxiv. 2020. Update in: PLoS Biol. 2021 Mar 17;19(3):e3001143. doi: 10.1371/journal.pbio.3001143 PMID: 32511382 Free PMC article. Updated. Preprint.
SARS-CoV-2 infection of the placenta.
Hosier H, Farhadian SF, Morotti RA, Deshmukh U, Lu-Culligan A, Campbell KH, Yasumoto Y, Vogels CB, Casanovas-Massana A, Vijayakumar P, Geng B, Odio CD, Fournier J, Brito AF, Fauver JR, Liu F, Alpert T, Tal R, Szigeti-Buck K, Perincheri S, Larsen C, Gariepy AM, Aguilar G, Fardelmann KL, Harigopal M, Taylor HS, Pettker CM, Wyllie AL, Cruz CD, Ring AM, Grubaugh ND, Ko AI, Horvath TL, Iwasaki A, Reddy UM, Lipkind HS. Hosier H, et al. Among authors: iwasaki a. J Clin Invest. 2020 Sep 1;130(9):4947-4953. doi: 10.1172/JCI139569. J Clin Invest. 2020. PMID: 32573498 Free PMC article.
Sex differences in immune responses to SARS-CoV-2 that underlie disease outcomes.
Takahashi T, Wong P, Ellingson MK, Lucas C, Klein J, Israelow B, Silva J, Oh JE, Mao T, Tokuyama M, Lu P, Venkataraman A, Park A, Liu F, Meir A, Sun J, Wang EY, Wyllie AL, Vogels CBF, Earnest R, Lapidus S, Ott IM, Moore AJ, Casanovas-Massana A, Cruz CD, Fournier JB, Odio CD, Farhadian S, Grubaugh ND, Schulz WL, Ko AI, Ring AM, Omer SB, Iwasaki A; Yale IMPACT research team. Takahashi T, et al. Among authors: iwasaki a. medRxiv [Preprint]. 2020 Jun 26:2020.06.06.20123414. doi: 10.1101/2020.06.06.20123414. medRxiv. 2020. Update in: Nature. 2020 Dec;588(7837):315-320. doi: 10.1038/s41586-020-2700-3 PMID: 32577695 Free PMC article. Updated. Preprint.
Analytical sensitivity and efficiency comparisons of SARS-CoV-2 RT-qPCR primer-probe sets.
Vogels CBF, Brito AF, Wyllie AL, Fauver JR, Ott IM, Kalinich CC, Petrone ME, Casanovas-Massana A, Catherine Muenker M, Moore AJ, Klein J, Lu P, Lu-Culligan A, Jiang X, Kim DJ, Kudo E, Mao T, Moriyama M, Oh JE, Park A, Silva J, Song E, Takahashi T, Taura M, Tokuyama M, Venkataraman A, Weizman OE, Wong P, Yang Y, Cheemarla NR, White EB, Lapidus S, Earnest R, Geng B, Vijayakumar P, Odio C, Fournier J, Bermejo S, Farhadian S, Dela Cruz CS, Iwasaki A, Ko AI, Landry ML, Foxman EF, Grubaugh ND. Vogels CBF, et al. Among authors: iwasaki a. Nat Microbiol. 2020 Oct;5(10):1299-1305. doi: 10.1038/s41564-020-0761-6. Epub 2020 Jul 10. Nat Microbiol. 2020. PMID: 32651556 Free PMC article.
Longitudinal analyses reveal immunological misfiring in severe COVID-19.
Lucas C, Wong P, Klein J, Castro TBR, Silva J, Sundaram M, Ellingson MK, Mao T, Oh JE, Israelow B, Takahashi T, Tokuyama M, Lu P, Venkataraman A, Park A, Mohanty S, Wang H, Wyllie AL, Vogels CBF, Earnest R, Lapidus S, Ott IM, Moore AJ, Muenker MC, Fournier JB, Campbell M, Odio CD, Casanovas-Massana A; Yale IMPACT Team; Herbst R, Shaw AC, Medzhitov R, Schulz WL, Grubaugh ND, Dela Cruz C, Farhadian S, Ko AI, Omer SB, Iwasaki A. Lucas C, et al. Among authors: iwasaki a. Nature. 2020 Aug;584(7821):463-469. doi: 10.1038/s41586-020-2588-y. Epub 2020 Jul 27. Nature. 2020. PMID: 32717743 Free PMC article.
1,159 results