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Page 1
Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia.
Kloetgen A, Thandapani P, Ntziachristos P, Ghebrechristos Y, Nomikou S, Lazaris C, Chen X, Hu H, Bakogianni S, Wang J, Fu Y, Boccalatte F, Zhong H, Paietta E, Trimarchi T, Zhu Y, Van Vlierberghe P, Inghirami GG, Lionnet T, Aifantis I, Tsirigos A. Kloetgen A, et al. Among authors: lionnet t. Nat Genet. 2020 Apr;52(4):388-400. doi: 10.1038/s41588-020-0602-9. Epub 2020 Mar 23. Nat Genet. 2020. PMID: 32203470 Free PMC article.
Statistical determination of the step size of molecular motors.
Neuman KC, Saleh OA, Lionnet T, Lia G, Allemand JF, Bensimon D, Croquette V. Neuman KC, et al. Among authors: lionnet t. J Phys Condens Matter. 2005 Nov 30;17(47):S3811-20. doi: 10.1088/0953-8984/17/47/012. Epub 2005 Nov 4. J Phys Condens Matter. 2005. PMID: 21690726
Sequence-dependent twist-stretch coupling in DNA.
Lionnet T, Lankas F. Lionnet T, et al. Biophys J. 2007 Feb 15;92(4):L30-2. doi: 10.1529/biophysj.106.099572. Epub 2006 Dec 1. Biophys J. 2007. PMID: 17142263 Free PMC article.
RS-FISH: precise, interactive, fast, and scalable FISH spot detection.
Bahry E, Breimann L, Zouinkhi M, Epstein L, Kolyvanov K, Mamrak N, King B, Long X, Harrington KIS, Lionnet T, Preibisch S. Bahry E, et al. Among authors: lionnet t. Nat Methods. 2022 Dec;19(12):1563-1567. doi: 10.1038/s41592-022-01669-y. Epub 2022 Nov 17. Nat Methods. 2022. PMID: 36396787 Free PMC article.
Cellular adaptation to cancer therapy along a resistance continuum.
França GS, Baron M, King BR, Bossowski JP, Bjornberg A, Pour M, Rao A, Patel AS, Misirlioglu S, Barkley D, Tang KH, Dolgalev I, Liberman DA, Avital G, Kuperwaser F, Chiodin M, Levine DA, Papagiannakopoulos T, Marusyk A, Lionnet T, Yanai I. França GS, et al. Among authors: lionnet t. Nature. 2024 Jul;631(8022):876-883. doi: 10.1038/s41586-024-07690-9. Epub 2024 Jul 10. Nature. 2024. PMID: 38987605
A transgenic mouse for in vivo detection of endogenous labeled mRNA.
Lionnet T, Czaplinski K, Darzacq X, Shav-Tal Y, Wells AL, Chao JA, Park HY, de Turris V, Lopez-Jones M, Singer RH. Lionnet T, et al. Nat Methods. 2011 Feb;8(2):165-70. doi: 10.1038/nmeth.1551. Epub 2011 Jan 16. Nat Methods. 2011. PMID: 21240280 Free PMC article.
A universal deep-learning model for zinc finger design enables transcription factor reprogramming.
Ichikawa DM, Abdin O, Alerasool N, Kogenaru M, Mueller AL, Wen H, Giganti DO, Goldberg GW, Adams S, Spencer JM, Razavi R, Nim S, Zheng H, Gionco C, Clark FT, Strokach A, Hughes TR, Lionnet T, Taipale M, Kim PM, Noyes MB. Ichikawa DM, et al. Among authors: lionnet t. Nat Biotechnol. 2023 Aug;41(8):1117-1129. doi: 10.1038/s41587-022-01624-4. Epub 2023 Jan 26. Nat Biotechnol. 2023. PMID: 36702896 Free PMC article.
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