Ortega JM - Search Results

1

SWeeP: representing large biological sequences datasets in compact vectors.

De Pierri CR, Voyceik R, Santos de Mattos LGC, Kulik MG, Camargo JO, Repula de Oliveira AM, de Lima Nichio BT, Marchaukoski JN, da Silva Filho AC, Guizelini D, Ortega JM, Pedrosa FO, Raittz RT. De Pierri CR, et al. Among authors: ortega jm. Sci Rep. 2020 Jan 9;10(1):91. doi: 10.1038/s41598-019-55627-4. Sci Rep. 2020. PMID: 31919449 Free PMC article.

2

Whole-Genome Sequence of Leptospira interrogans Serovar Hardjo Subtype Hardjoprajitno Strain Norma, Isolated from Cattle in a Leptospirosis Outbreak in Brazil.

Cosate MR, Soares SC, Mendes TA, Raittz RT, Moreira EC, Leite R, Fernandes GR, Haddad JP, Ortega JM. Cosate MR, et al. Among authors: ortega jm. Genome Announc. 2015 Nov 5;3(6):e01302-15. doi: 10.1128/genomeA.01302-15. Genome Announc. 2015. PMID: 26543126 Free PMC article.

3

BOWS (bioinformatics open web services) to centralize bioinformatics tools in web services.

Velloso H, Vialle RA, Ortega JM. Velloso H, et al. Among authors: ortega jm. BMC Res Notes. 2015 Jun 2;8:206. doi: 10.1186/s13104-015-1190-0. BMC Res Notes. 2015. PMID: 26032494 Free PMC article.

4

Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes.

Lopes KP, Campos-Laborie FJ, Vialle RA, Ortega JM, De Las Rivas J. Lopes KP, et al. Among authors: ortega jm. BMC Genomics. 2016 Oct 25;17(Suppl 8):725. doi: 10.1186/s12864-016-3062-y. BMC Genomics. 2016. PMID: 27801289 Free PMC article.

5

A procedure to recruit members to enlarge protein family databases--the building of UECOG (UniRef-Enriched COG Database) as a model.

Fernandes GR, Barbosa DV, Prosdocimi F, Pena IA, Santana-Santos L, Coelho Junior O, Barbosa-Silva A, Velloso HM, Mudado MA, Natale DA, Faria-Campos AC, Aguiar SC, Ortega JM. Fernandes GR, et al. Among authors: ortega jm. Genet Mol Res. 2008 Sep 30;7(3):910-24. doi: 10.4238/vol7-3x-meeting008. Genet Mol Res. 2008. PMID: 18949709 Free article.

6

An algorithm to infer similarity among cell types and organisms by examining the most expressed sequences.

Pinto SA, Ortega JM. Pinto SA, et al. Among authors: ortega jm. Genet Mol Res. 2008 Sep 30;7(3):933-47. doi: 10.4238/vol7-3x-meeting010. Genet Mol Res. 2008. PMID: 18949711 Free article.

7

Development of SRS.php, a Simple Object Access Protocol-based library for data acquisition from integrated biological databases.

Barbosa-Silva A, Pafilis E, Ortega JM, Schneider R. Barbosa-Silva A, et al. Among authors: ortega jm. Genet Mol Res. 2007 Dec 11;6(4):1142-50. Genet Mol Res. 2007. PMID: 18273808 Free article.

8

Plant Aquaporins: Diversity, Evolution and Biotechnological Applications.

Bezerra-Neto JP, de Araújo FC, Ferreira-Neto JRC, da Silva MD, Pandolfi V, Aburjaile FF, Sakamoto T, de Oliveira Silva RL, Kido EA, Barbosa Amorim LL, Ortega JM, Benko-Iseppon AM. Bezerra-Neto JP, et al. Among authors: ortega jm. Curr Protein Pept Sci. 2019;20(4):368-395. doi: 10.2174/1389203720666181102095910. Curr Protein Pept Sci. 2019. PMID: 30387391 Review.

9

Efficient secondary database driven annotation using model organism sequences.

Faria-Campos AC, Campos SV, Prosdocimi F, Franco GC, Franco GR, Ortega JM. Faria-Campos AC, et al. Among authors: ortega jm. In Silico Biol. 2006;6(5):363-72. In Silico Biol. 2006. PMID: 17274765

10

Evaluation of window cohabitation of DNA sequencing errors and lowest PHRED quality values.

Prosdocimi F, Peixoto FC, Ortega JM. Prosdocimi F, et al. Among authors: ortega jm. Genet Mol Res. 2004 Dec 30;3(4):483-92. Genet Mol Res. 2004. PMID: 15688315 Free article.

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