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Page 1
Mapping and Dynamics of Regulatory DNA in Maturing Arabidopsis thaliana Siliques.
Sullivan AM, Arsovski AA, Thompson A, Sandstrom R, Thurman RE, Neph S, Johnson AK, Sullivan ST, Sabo PJ, Neri FV 3rd, Weaver M, Diegel M, Nemhauser JL, Stamatoyannopoulos JA, Bubb KL, Queitsch C. Sullivan AM, et al. Among authors: sullivan st. Front Plant Sci. 2019 Nov 14;10:1434. doi: 10.3389/fpls.2019.01434. eCollection 2019. Front Plant Sci. 2019. PMID: 31798605 Free PMC article.
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana.
Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Sullivan AM, et al. Among authors: sullivan st. Cell Rep. 2014 Sep 25;8(6):2015-2030. doi: 10.1016/j.celrep.2014.08.019. Epub 2014 Sep 15. Cell Rep. 2014. PMID: 25220462 Free article.
Integrated Functional Genomic Analysis Enables Annotation of Kidney Genome-Wide Association Study Loci.
Sieber KB, Batorsky A, Siebenthall K, Hudkins KL, Vierstra JD, Sullivan S, Sur A, McNulty M, Sandstrom R, Reynolds A, Bates D, Diegel M, Dunn D, Nelson J, Buckley M, Kaul R, Sampson MG, Himmelfarb J, Alpers CE, Waterworth D, Akilesh S. Sieber KB, et al. J Am Soc Nephrol. 2019 Mar;30(3):421-441. doi: 10.1681/ASN.2018030309. Epub 2019 Feb 13. J Am Soc Nephrol. 2019. PMID: 30760496 Free PMC article.
Genomic Resources to Guide Improvement of the Shea Tree.
Hale I, Ma X, Melo ATO, Padi FK, Hendre PS, Kingan SB, Sullivan ST, Chen S, Boffa JM, Muchugi A, Danquah A, Barnor MT, Jamnadass R, Van de Peer Y, Van Deynze A. Hale I, et al. Among authors: sullivan st. Front Plant Sci. 2021 Sep 9;12:720670. doi: 10.3389/fpls.2021.720670. eCollection 2021. Front Plant Sci. 2021. PMID: 34567033 Free PMC article.
Degradation of Recalcitrant Polyurethane and Xenobiotic Additives by a Selected Landfill Microbial Community and Its Biodegradative Potential Revealed by Proximity Ligation-Based Metagenomic Analysis.
Gaytán I, Sánchez-Reyes A, Burelo M, Vargas-Suárez M, Liachko I, Press M, Sullivan S, Cruz-Gómez MJ, Loza-Tavera H. Gaytán I, et al. Front Microbiol. 2020 Jan 22;10:2986. doi: 10.3389/fmicb.2019.02986. eCollection 2019. Front Microbiol. 2020. PMID: 32038514 Free PMC article.
Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs.
Liu Y, Fu Y, Yang Y, Yi G, Lian J, Xie B, Yao Y, Chen M, Niu Y, Liu L, Wang L, Zhang Y, Fan X, Tang Y, Yuan P, Zhu M, Li Q, Zhang S, Chen Y, Wang B, He J, Lu D, Liachko I, Sullivan ST, Pang B, Chen Y, He X, Li K, Tang Z. Liu Y, et al. Among authors: sullivan st. Genet Sel Evol. 2022 Sep 14;54(1):62. doi: 10.1186/s12711-022-00754-2. Genet Sel Evol. 2022. PMID: 36104777 Free PMC article.
A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.).
McGrath JM, Funk A, Galewski P, Ou S, Townsend B, Davenport K, Daligault H, Johnson S, Lee J, Hastie A, Darracq A, Willems G, Barnes S, Liachko I, Sullivan S, Koren S, Phillippy A, Wang J, Liu T, Pulman J, Childs K, Shu S, Yocum A, Fermin D, Mutasa-Göttgens E, Stevanato P, Taguchi K, Naegele R, Dorn KM. McGrath JM, et al. DNA Res. 2023 Feb 1;30(1):dsac033. doi: 10.1093/dnares/dsac033. DNA Res. 2023. PMID: 36208288 Free PMC article.
Gaur genome reveals expansion of sperm odorant receptors in domesticated cattle.
Low WY, Rosen BD, Ren Y, Bickhart DM, To TH, Martin FJ, Billis K, Sonstegard TS, Sullivan ST, Hiendleder S, Williams JL, Heaton MP, Smith TPL. Low WY, et al. Among authors: sullivan st. BMC Genomics. 2022 May 4;23(1):344. doi: 10.1186/s12864-022-08561-1. BMC Genomics. 2022. PMID: 35508966 Free PMC article.
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C.
Kronenberg ZN, Rhie A, Koren S, Concepcion GT, Peluso P, Munson KM, Porubsky D, Kuhn K, Mueller KA, Low WY, Hiendleder S, Fedrigo O, Liachko I, Hall RJ, Phillippy AM, Eichler EE, Williams JL, Smith TPL, Jarvis ED, Sullivan ST, Kingan SB. Kronenberg ZN, et al. Among authors: sullivan st. Nat Commun. 2021 Apr 28;12(1):1935. doi: 10.1038/s41467-020-20536-y. Nat Commun. 2021. PMID: 33911078 Free PMC article.
50 results