Varet H - Search Results

1

Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages.

Dubois V, Pawlik A, Bories A, Le Moigne V, Sismeiro O, Legendre R, Varet H, Rodríguez-Ordóñez MDP, Gaillard JL, Coppée JY, Brosch R, Herrmann JL, Girard-Misguich F. Dubois V, et al. Among authors: varet h. PLoS Pathog. 2019 Nov 8;15(11):e1008069. doi: 10.1371/journal.ppat.1008069. eCollection 2019 Nov. PLoS Pathog. 2019. PMID: 31703112 Free PMC article.

2

Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns.

Balloy V, Varet H, Dillies MA, Proux C, Jagla B, Coppée JY, Tabary O, Corvol H, Chignard M, Guillot L. Balloy V, et al. Among authors: varet h. PLoS One. 2015 Oct 20;10(10):e0140979. doi: 10.1371/journal.pone.0140979. eCollection 2015. PLoS One. 2015. PMID: 26485688 Free PMC article.

3

SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data.

Varet H, Brillet-Guéguen L, Coppée JY, Dillies MA. Varet H, et al. PLoS One. 2016 Jun 9;11(6):e0157022. doi: 10.1371/journal.pone.0157022. eCollection 2016. PLoS One. 2016. PMID: 27280887 Free PMC article.

4

Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite.

Farasin J, Koechler S, Varet H, Deschamps J, Dillies MA, Proux C, Erhardt M, Huber A, Jagla B, Briandet R, Coppée JY, Arsène-Ploetze F. Farasin J, et al. Among authors: varet h. Microb Biotechnol. 2017 Jul;10(4):789-803. doi: 10.1111/1751-7915.12556. Epub 2017 Feb 7. Microb Biotechnol. 2017. PMID: 28169492 Free PMC article.

5

In Situ Fixation Redefines Quiescence and Early Activation of Skeletal Muscle Stem Cells.

Machado L, Esteves de Lima J, Fabre O, Proux C, Legendre R, Szegedi A, Varet H, Ingerslev LR, Barrès R, Relaix F, Mourikis P. Machado L, et al. Among authors: varet h. Cell Rep. 2017 Nov 14;21(7):1982-1993. doi: 10.1016/j.celrep.2017.10.080. Cell Rep. 2017. PMID: 29141227 Free article.

6

Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation.

Krin E, Pierlé SA, Sismeiro O, Jagla B, Dillies MA, Varet H, Irazoki O, Campoy S, Rouy Z, Cruveiller S, Médigue C, Coppée JY, Mazel D. Krin E, et al. Among authors: varet h. BMC Genomics. 2018 May 21;19(1):373. doi: 10.1186/s12864-018-4716-8. BMC Genomics. 2018. PMID: 29783948 Free PMC article.

7

Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries.

Randrianjatovo-Gbalou I, Rosario S, Sismeiro O, Varet H, Legendre R, Coppée JY, Huteau V, Pochet S, Delarue M. Randrianjatovo-Gbalou I, et al. Among authors: varet h. Nucleic Acids Res. 2018 Jul 6;46(12):6271-6284. doi: 10.1093/nar/gky413. Nucleic Acids Res. 2018. PMID: 29788485 Free PMC article.

8

Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica.

Varet H, Shaulov Y, Sismeiro O, Trebicz-Geffen M, Legendre R, Coppée JY, Ankri S, Guillen N. Varet H, et al. Sci Rep. 2018 Jun 13;8(1):9042. doi: 10.1038/s41598-018-27086-w. Sci Rep. 2018. PMID: 29899530 Free PMC article.

9

checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes.

Varet H, Coppée JY. Varet H, et al. Bioinformatics. 2019 Mar 1;35(5):901-902. doi: 10.1093/bioinformatics/bty706. Bioinformatics. 2019. PMID: 30165585 Free PMC article.

10

Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype.

Hommel B, Sturny-Leclère A, Volant S, Veluppillai N, Duchateau M, Yu CH, Hourdel V, Varet H, Matondo M, Perfect JR, Casadevall A, Dromer F, Alanio A. Hommel B, et al. Among authors: varet h. PLoS Pathog. 2019 Jul 29;15(7):e1007945. doi: 10.1371/journal.ppat.1007945. eCollection 2019 Jul. PLoS Pathog. 2019. PMID: 31356623 Free PMC article.

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