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Data integration in the era of omics: current and future challenges.
Gomez-Cabrero D, Abugessaisa I, Maier D, Teschendorff A, Merkenschlager M, Gisel A, Ballestar E, Bongcam-Rudloff E, Conesa A, Tegnér J. Gomez-Cabrero D, et al. Among authors: merkenschlager m. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):I1. doi: 10.1186/1752-0509-8-S2-I1. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25032990 Free PMC article. Review.
Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation.
Ferreirós-Vidal I, Carroll T, Zhang T, Lagani V, Ramirez RN, Ing-Simmons E, Gómez-Valadés AG, Cooper L, Liang Z, Papoutsoglou G, Dharmalingam G, Guo Y, Tarazona S, Fernandes SJ, Noori P, Silberberg G, Fisher AG, Tsamardinos I, Mortazavi A, Lenhard B, Conesa A, Tegner J, Merkenschlager M, Gomez-Cabrero D. Ferreirós-Vidal I, et al. Among authors: merkenschlager m. PLoS Biol. 2019 Apr 12;17(4):e2006506. doi: 10.1371/journal.pbio.2006506. eCollection 2019 Apr. PLoS Biol. 2019. PMID: 30978178 Free PMC article.
STATegra, a comprehensive multi-omics dataset of B-cell differentiation in mouse.
Gomez-Cabrero D, Tarazona S, Ferreirós-Vidal I, Ramirez RN, Company C, Schmidt A, Reijmers T, Paul VVS, Marabita F, Rodríguez-Ubreva J, Garcia-Gomez A, Carroll T, Cooper L, Liang Z, Dharmalingam G, van der Kloet F, Harms AC, Balzano-Nogueira L, Lagani V, Tsamardinos I, Lappe M, Maier D, Westerhuis JA, Hankemeier T, Imhof A, Ballestar E, Mortazavi A, Merkenschlager M, Tegner J, Conesa A. Gomez-Cabrero D, et al. Among authors: merkenschlager m. Sci Data. 2019 Oct 31;6(1):256. doi: 10.1038/s41597-019-0202-7. Sci Data. 2019. PMID: 31672995 Free PMC article.
Competition shapes the landscape of X-chromosome-linked genetic diversity.
Buenaventura T, Bagci H, Patrascan I, Graham JJ, Hipwell KD, Oldenkamp R, King JWD, Urtasun J, Young G, Mouzo D, Gomez-Cabrero D, Rowland BD, Panne D, Fisher AG, Merkenschlager M. Buenaventura T, et al. Among authors: merkenschlager m. Nat Genet. 2024 Aug;56(8):1678-1688. doi: 10.1038/s41588-024-01840-5. Epub 2024 Jul 26. Nat Genet. 2024. PMID: 39060501 Free PMC article.
Genome-wide identification of Ikaros targets elucidates its contribution to mouse B-cell lineage specification and pre-B-cell differentiation.
Ferreirós-Vidal I, Carroll T, Taylor B, Terry A, Liang Z, Bruno L, Dharmalingam G, Khadayate S, Cobb BS, Smale ST, Spivakov M, Srivastava P, Petretto E, Fisher AG, Merkenschlager M. Ferreirós-Vidal I, et al. Among authors: merkenschlager m. Blood. 2013 Mar 7;121(10):1769-82. doi: 10.1182/blood-2012-08-450114. Epub 2013 Jan 9. Blood. 2013. PMID: 23303821 Free article.
192 results