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MetDecode: methylation-based deconvolution of cell-free DNA for noninvasive multi-cancer typing.
Passemiers A, Tuveri S, Sudhakaran D, Jatsenko T, Laga T, Punie K, Hatse S, Tejpar S, Coosemans A, Van Nieuwenhuysen E, Timmerman D, Floris G, Van Rompuy AS, Sagaert X, Testa A, Ficherova D, Raimondi D, Amant F, Lenaerts L, Moreau Y, Vermeesch JR. Passemiers A, et al. Among authors: tuveri s. Bioinformatics. 2024 Sep 2;40(9):btae522. doi: 10.1093/bioinformatics/btae522. Bioinformatics. 2024. PMID: 39177091 Free PMC article.
Cell type signatures in cell-free DNA fragmentation profiles reveal disease biology.
Stanley KE, Jatsenko T, Tuveri S, Sudhakaran D, Lannoo L, Van Calsteren K, de Borre M, Van Parijs I, Van Coillie L, Van Den Bogaert K, De Almeida Toledo R, Lenaerts L, Tejpar S, Punie K, Rengifo LY, Vandenberghe P, Thienpont B, Vermeesch JR. Stanley KE, et al. Among authors: tuveri s. Nat Commun. 2024 Mar 12;15(1):2220. doi: 10.1038/s41467-024-46435-0. Nat Commun. 2024. PMID: 38472221 Free PMC article.