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Landscape of stimulation-responsive chromatin across diverse human immune cells.
Calderon D, Nguyen MLT, Mezger A, Kathiria A, Müller F, Nguyen V, Lescano N, Wu B, Trombetta J, Ribado JV, Knowles DA, Gao Z, Blaeschke F, Parent AV, Burt TD, Anderson MS, Criswell LA, Greenleaf WJ, Marson A, Pritchard JK. Calderon D, et al. Among authors: muller f. Nat Genet. 2019 Oct;51(10):1494-1505. doi: 10.1038/s41588-019-0505-9. Epub 2019 Sep 30. Nat Genet. 2019. PMID: 31570894 Free PMC article.
Charting a dynamic DNA methylation landscape of the human genome.
Ziller MJ, Gu H, Müller F, Donaghey J, Tsai LT, Kohlbacher O, De Jager PL, Rosen ED, Bennett DA, Bernstein BE, Gnirke A, Meissner A. Ziller MJ, et al. Among authors: muller f. Nature. 2013 Aug 22;500(7463):477-81. doi: 10.1038/nature12433. Epub 2013 Aug 7. Nature. 2013. PMID: 23925113 Free PMC article.
Multifaceted role for p53 in pancreatic cancer suppression.
Mello SS, Flowers BM, Mazur PK, Lee JJ, Müller F, Denny SK, Ferreira S, Hanson K, Kim SK, Greenleaf WJ, Wood LD, Attardi LD. Mello SS, et al. Among authors: muller f. Proc Natl Acad Sci U S A. 2023 Mar 7;120(10):e2211937120. doi: 10.1073/pnas.2211937120. Epub 2023 Feb 27. Proc Natl Acad Sci U S A. 2023. PMID: 36848578 Free PMC article.
Single-cell transcriptomic landscape of the developing human spinal cord.
Andersen J, Thom N, Shadrach JL, Chen X, Onesto MM, Amin ND, Yoon SJ, Li L, Greenleaf WJ, Müller F, Pașca AM, Kaltschmidt JA, Pașca SP. Andersen J, et al. Among authors: muller f. Nat Neurosci. 2023 May;26(5):902-914. doi: 10.1038/s41593-023-01311-w. Epub 2023 Apr 24. Nat Neurosci. 2023. PMID: 37095394
Quantitative comparison of genome-wide DNA methylation mapping technologies.
Bock C, Tomazou EM, Brinkman AB, Müller F, Simmer F, Gu H, Jäger N, Gnirke A, Stunnenberg HG, Meissner A. Bock C, et al. Among authors: muller f. Nat Biotechnol. 2010 Oct;28(10):1106-14. doi: 10.1038/nbt.1681. Epub 2010 Sep 19. Nat Biotechnol. 2010. PMID: 20852634 Free PMC article.
Comprehensive analysis of DNA methylation data with RnBeads.
Assenov Y, Müller F, Lutsik P, Walter J, Lengauer T, Bock C. Assenov Y, et al. Among authors: muller f. Nat Methods. 2014 Nov;11(11):1138-1140. doi: 10.1038/nmeth.3115. Epub 2014 Sep 28. Nat Methods. 2014. PMID: 25262207 Free PMC article.
Epigenomic Profiling of Human CD4+ T Cells Supports a Linear Differentiation Model and Highlights Molecular Regulators of Memory Development.
Durek P, Nordström K, Gasparoni G, Salhab A, Kressler C, de Almeida M, Bassler K, Ulas T, Schmidt F, Xiong J, Glažar P, Klironomos F, Sinha A, Kinkley S, Yang X, Arrigoni L, Amirabad AD, Ardakani FB, Feuerbach L, Gorka O, Ebert P, Müller F, Li N, Frischbutter S, Schlickeiser S, Cendon C, Fröhler S, Felder B, Gasparoni N, Imbusch CD, Hutter B, Zipprich G, Tauchmann Y, Reinke S, Wassilew G, Hoffmann U, Richter AS, Sieverling L; DEEP Consortium; Chang HD, Syrbe U, Kalus U, Eils J, Brors B, Manke T, Ruland J, Lengauer T, Rajewsky N, Chen W, Dong J, Sawitzki B, Chung HR, Rosenstiel P, Schulz MH, Schultze JL, Radbruch A, Walter J, Hamann A, Polansky JK. Durek P, et al. Among authors: muller f. Immunity. 2016 Nov 15;45(5):1148-1161. doi: 10.1016/j.immuni.2016.10.022. Immunity. 2016. PMID: 27851915 Free article.
Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data.
Nordström KJV, Schmidt F, Gasparoni N, Salhab A, Gasparoni G, Kattler K, Müller F, Ebert P, Costa IG; DEEP consortium; Pfeifer N, Lengauer T, Schulz MH, Walter J. Nordström KJV, et al. Among authors: muller f. Nucleic Acids Res. 2019 Nov 18;47(20):10580-10596. doi: 10.1093/nar/gkz799. Nucleic Acids Res. 2019. PMID: 31584093 Free PMC article.
3,214 results