Karakülah G - Search Results

1

Dysregulated expression of repetitive DNA in ER+/HER2- breast cancer.

Yandım C, Karakülah G. Yandım C, et al. Among authors: karakulah g. Cancer Genet. 2019 Nov;239:36-45. doi: 10.1016/j.cancergen.2019.09.002. Epub 2019 Sep 6. Cancer Genet. 2019. PMID: 31536958

2

Expression dynamics of repetitive DNA in early human embryonic development.

Yandım C, Karakülah G. Yandım C, et al. Among authors: karakulah g. BMC Genomics. 2019 May 31;20(1):439. doi: 10.1186/s12864-019-5803-1. BMC Genomics. 2019. PMID: 31151386 Free PMC article.

3

TEffectR: an R package for studying the potential effects of transposable elements on gene expression with linear regression model.

Karakülah G, Arslan N, Yandım C, Suner A. Karakülah G, et al. PeerJ. 2019 Dec 5;7:e8192. doi: 10.7717/peerj.8192. eCollection 2019. PeerJ. 2019. PMID: 31824778 Free PMC article.

4

Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence.

KarakÜlah G, Yandim C. KarakÜlah G, et al. Turk J Biol. 2020 Dec 14;44(6):356-370. doi: 10.3906/biy-2005-21. eCollection 2020. Turk J Biol. 2020. PMID: 33402863 Free PMC article.

5

Identification of differentially expressed genomic repeats in primary hepatocellular carcinoma and their potential links to biological processes and survival.

Karakülah G, Yandim C. Karakülah G, et al. Turk J Biol. 2021 Oct 18;45(5):599-612. doi: 10.3906/biy-2104-13. eCollection 2021. Turk J Biol. 2021. PMID: 34803457 Free PMC article.

6

Repeat expression is linked to patient survival and exhibits single nucleotide variation in pancreatic cancer revealing LTR70:r.879A>G.

Yandım C, Karakülah G. Yandım C, et al. Among authors: karakulah g. Gene. 2022 May 15;822:146344. doi: 10.1016/j.gene.2022.146344. Epub 2022 Feb 17. Gene. 2022. PMID: 35183687

7

PlanTEnrichment: A tool for enrichment analysis of transposable elements in plants.

Karakülah G, Suner A. Karakülah G, et al. Genomics. 2017 Oct;109(5-6):336-340. doi: 10.1016/j.ygeno.2017.05.008. Epub 2017 Jun 1. Genomics. 2017. PMID: 28577791 Free article.

8

Analysis of open chromatin regions in bladder cancer links β-catenin mutations and Wnt signaling with neuronal subtype of bladder cancer.

Eray A, Güneri PY, Yılmaz GÖ, Karakülah G, Erkek-Ozhan S. Eray A, et al. Among authors: karakulah g. Sci Rep. 2020 Oct 29;10(1):18667. doi: 10.1038/s41598-020-75688-0. Sci Rep. 2020. PMID: 33122695 Free PMC article.

9

In Silico Identification of Stress-Associated Transposable Elements in Arabidopsis thaliana Using Public Transcriptome Data.

Eskier D, Karakülah G. Eskier D, et al. Among authors: karakulah g. Methods Mol Biol. 2021;2250:15-30. doi: 10.1007/978-1-0716-1134-0_2. Methods Mol Biol. 2021. PMID: 33900589

10

Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach.

Theofylaktou D, Takan I, Karakülah G, Biz GM, Zanni V, Pavlopoulou A, Georgakilas AG. Theofylaktou D, et al. Among authors: karakulah g. Oxid Med Cell Longev. 2021 Aug 12;2021:9993518. doi: 10.1155/2021/9993518. eCollection 2021. Oxid Med Cell Longev. 2021. PMID: 34422220 Free PMC article.

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