Zinovyev A - Search Results

1

Deconvolution of transcriptomes and miRNomes by independent component analysis provides insights into biological processes and clinical outcomes of melanoma patients.

Nazarov PV, Wienecke-Baldacchino AK, Zinovyev A, Czerwińska U, Muller A, Nashan D, Dittmar G, Azuaje F, Kreis S. Nazarov PV, et al. Among authors: zinovyev a. BMC Med Genomics. 2019 Sep 18;12(1):132. doi: 10.1186/s12920-019-0578-4. BMC Med Genomics. 2019. PMID: 31533822 Free PMC article.

2

DeDaL: Cytoscape 3 app for producing and morphing data-driven and structure-driven network layouts.

Czerwinska U, Calzone L, Barillot E, Zinovyev A. Czerwinska U, et al. Among authors: zinovyev a. BMC Syst Biol. 2015 Aug 14;9:46. doi: 10.1186/s12918-015-0189-4. BMC Syst Biol. 2015. PMID: 26271256 Free PMC article.

3

Determining the optimal number of independent components for reproducible transcriptomic data analysis.

Kairov U, Cantini L, Greco A, Molkenov A, Czerwinska U, Barillot E, Zinovyev A. Kairov U, et al. Among authors: zinovyev a. BMC Genomics. 2017 Sep 11;18(1):712. doi: 10.1186/s12864-017-4112-9. BMC Genomics. 2017. PMID: 28893186 Free PMC article.

4

Metabolic and signalling network maps integration: application to cross-talk studies and omics data analysis in cancer.

Sompairac N, Modamio J, Barillot E, Fleming RMT, Zinovyev A, Kuperstein I. Sompairac N, et al. Among authors: zinovyev a. BMC Bioinformatics. 2019 Apr 18;20(Suppl 4):140. doi: 10.1186/s12859-019-2682-z. BMC Bioinformatics. 2019. PMID: 30999838 Free PMC article.

5

Independent Component Analysis for Unraveling the Complexity of Cancer Omics Datasets.

Sompairac N, Nazarov PV, Czerwinska U, Cantini L, Biton A, Molkenov A, Zhumadilov Z, Barillot E, Radvanyi F, Gorban A, Kairov U, Zinovyev A. Sompairac N, et al. Among authors: zinovyev a. Int J Mol Sci. 2019 Sep 7;20(18):4414. doi: 10.3390/ijms20184414. Int J Mol Sci. 2019. PMID: 31500324 Free PMC article. Review.

6

A multiscale signalling network map of innate immune response in cancer reveals cell heterogeneity signatures.

Kondratova M, Czerwinska U, Sompairac N, Amigorena SD, Soumelis V, Barillot E, Zinovyev A, Kuperstein I. Kondratova M, et al. Among authors: zinovyev a. Nat Commun. 2019 Oct 22;10(1):4808. doi: 10.1038/s41467-019-12270-x. Nat Commun. 2019. PMID: 31641119 Free PMC article.

7

Collective intelligence defines biological functions in Wikipedia as communities in the hidden protein connection network.

Zinovyev A, Czerwinska U, Cantini L, Barillot E, Frahm KM, Shepelyansky DL. Zinovyev A, et al. PLoS Comput Biol. 2020 Feb 18;16(2):e1007652. doi: 10.1371/journal.pcbi.1007652. eCollection 2020 Feb. PLoS Comput Biol. 2020. PMID: 32069277 Free PMC article.

8

BIODICA: a computational environment for Independent Component Analysis of omics data.

Captier N, Merlevede J, Molkenov A, Seisenova A, Zhubanchaliyev A, Nazarov PV, Barillot E, Kairov U, Zinovyev A. Captier N, et al. Among authors: zinovyev a. Bioinformatics. 2022 May 13;38(10):2963-2964. doi: 10.1093/bioinformatics/btac204. Bioinformatics. 2022. PMID: 35561190

9

scEvoNet: a gradient boosting-based method for prediction of cell state evolution.

Kotov A, Zinovyev A, Monsoro-Burq AH. Kotov A, et al. Among authors: zinovyev a. BMC Bioinformatics. 2023 Mar 6;24(1):83. doi: 10.1186/s12859-023-05213-3. BMC Bioinformatics. 2023. PMID: 36879200 Free PMC article.

10

consICA: an R package for robust reference-free deconvolution of multi-omics data.

Chepeleva M, Kaoma T, Zinovyev A, Toth R, Nazarov PV. Chepeleva M, et al. Among authors: zinovyev a. Bioinform Adv. 2024 Jul 13;4(1):vbae102. doi: 10.1093/bioadv/vbae102. eCollection 2024. Bioinform Adv. 2024. PMID: 39027644 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

116 results

Search Page

Filters