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Page 1
Molecular Docking Simulations with ArgusLab.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:203-220. doi: 10.1007/978-1-4939-9752-7_13. Methods Mol Biol. 2019. PMID: 31452107
Taba: A Tool to Analyze the Binding Affinity.
da Silva AD, Bitencourt-Ferreira G, de Azevedo WF Jr. da Silva AD, et al. J Comput Chem. 2020 Jan 5;41(1):69-73. doi: 10.1002/jcc.26048. Epub 2019 Aug 13. J Comput Chem. 2020. PMID: 31410856
How Docking Programs Work.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:35-50. doi: 10.1007/978-1-4939-9752-7_3. Methods Mol Biol. 2019. PMID: 31452097
SAnDReS: A Computational Tool for Docking.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:51-65. doi: 10.1007/978-1-4939-9752-7_4. Methods Mol Biol. 2019. PMID: 31452098
Electrostatic Energy in Protein-Ligand Complexes.
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:67-77. doi: 10.1007/978-1-4939-9752-7_5. Methods Mol Biol. 2019. PMID: 31452099
Van der Waals Potential in Protein Complexes.
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:79-91. doi: 10.1007/978-1-4939-9752-7_6. Methods Mol Biol. 2019. PMID: 31452100
Hydrogen Bonds in Protein-Ligand Complexes.
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:93-107. doi: 10.1007/978-1-4939-9752-7_7. Methods Mol Biol. 2019. PMID: 31452101
Molecular Dynamics Simulations with NAMD2.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:109-124. doi: 10.1007/978-1-4939-9752-7_8. Methods Mol Biol. 2019. PMID: 31452102
Docking with AutoDock4.
Bitencourt-Ferreira G, Pintro VO, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:125-148. doi: 10.1007/978-1-4939-9752-7_9. Methods Mol Biol. 2019. PMID: 31452103
25 results