Ponomarev GV - Search Results

1

Predictive models of protease specificity based on quantitative protease-activity profiling data.

Fedonin GG, Eroshkin A, Cieplak P, Matveev EV, Ponomarev GV, Gelfand MS, Ratnikov BI, Kazanov MD. Fedonin GG, et al. Among authors: ponomarev gv. Biochim Biophys Acta Proteins Proteom. 2019 Nov;1867(11):140253. doi: 10.1016/j.bbapap.2019.07.006. Epub 2019 Jul 19. Biochim Biophys Acta Proteins Proteom. 2019. PMID: 31330204 Free PMC article.

2

Evaluation and comparison of current fetal ultrasound image segmentation methods for biometric measurements: a grand challenge.

Rueda S, Fathima S, Knight CL, Yaqub M, Papageorghiou AT, Rahmatullah B, Foi A, Maggioni M, Pepe A, Tohka J, Stebbing RV, McManigle JE, Ciurte A, Bresson X, Cuadra MB, Sun C, Ponomarev GV, Gelfand MS, Kazanov MD, Wang CW, Chen HC, Peng CW, Hung CM, Noble JA. Rueda S, et al. Among authors: ponomarev gv. IEEE Trans Med Imaging. 2014 Apr;33(4):797-813. doi: 10.1109/TMI.2013.2276943. Epub 2013 Aug 6. IEEE Trans Med Imaging. 2014. PMID: 23934664

3

Analysis of gene expression and mutation data points on contribution of transcription to the mutagenesis by APOBEC enzymes.

Chervova A, Fatykhov B, Koblov A, Shvarov E, Preobrazhenskaya J, Vinogradov D, Ponomarev GV, Gelfand MS, Kazanov MD. Chervova A, et al. Among authors: ponomarev gv. NAR Cancer. 2021 Jul 2;3(3):zcab025. doi: 10.1093/narcan/zcab025. eCollection 2021 Sep. NAR Cancer. 2021. PMID: 34316712 Free PMC article.

4

APOBEC mutagenesis is low in most types of non-B DNA structures.

Ponomarev GV, Fatykhov B, Nazarov VA, Abasov R, Shvarov E, Landik NV, Denisova AA, Chervova AA, Gelfand MS, Kazanov MD. Ponomarev GV, et al. iScience. 2022 Jun 6;25(7):104535. doi: 10.1016/j.isci.2022.104535. eCollection 2022 Jul 15. iScience. 2022. PMID: 35754742 Free PMC article.

5

Predicting Structural Susceptibility of Proteins to Proteolytic Processing.

Matveev EV, Safronov VV, Ponomarev GV, Kazanov MD. Matveev EV, et al. Among authors: ponomarev gv. Int J Mol Sci. 2023 Jun 28;24(13):10761. doi: 10.3390/ijms241310761. Int J Mol Sci. 2023. PMID: 37445939 Free PMC article.

6

Genome-wide bioinformatics analysis of human protease capacity for proteolytic cleavage of the SARS-CoV-2 spike glycoprotein.

Matveev EV, Ponomarev GV, Kazanov MD. Matveev EV, et al. Among authors: ponomarev gv. Microbiol Spectr. 2024 Feb 6;12(2):e0353023. doi: 10.1128/spectrum.03530-23. Epub 2024 Jan 8. Microbiol Spectr. 2024. PMID: 38189333 Free PMC article.

7

[A Bioinformatics Method for Identification of Human Proteases Active against Viral Envelope Glycoproteins: A Case Study on the SARS-CoV-2 Spike Protein].

Matveev EV, Ponomarev GV, Kazanov MD. Matveev EV, et al. Among authors: ponomarev gv. Mol Biol (Mosk). 2024 Jan-Feb;58(1):171-177. Mol Biol (Mosk). 2024. PMID: 38943589 Russian.

8

Analysis of the abundance and diversity of RNA secondary structure elements in RNA viruses using the RNAsselem Python package.

Kazanov FM, Matveev EV, Ponomarev GV, Ivankov DN, Kazanov MD. Kazanov FM, et al. Among authors: ponomarev gv. Sci Rep. 2024 Nov 19;14(1):28587. doi: 10.1038/s41598-024-80240-5. Sci Rep. 2024. PMID: 39562668 Free PMC article.

9

Direct C-H borylation of vinylporphyrins via copper catalysis.

Belyaev ES, Kozhemyakin GL, Tyurin VS, Frolova VV, Lonin IS, Ponomarev GV, Buryak AK, Zamilatskov IA. Belyaev ES, et al. Among authors: ponomarev gv. Org Biomol Chem. 2022 Mar 2;20(9):1926-1932. doi: 10.1039/d1ob02005f. Org Biomol Chem. 2022. PMID: 35166755

10

Carbene functionalization of porphyrinoids through tosylhydrazones.

Kozhemyakin GL, Tyurin VS, Shkirdova AO, Belyaev ES, Kirinova ES, Ponomarev GV, Chistov AA, Aralov AV, Tafeenko VA, Zamilatskov IA. Kozhemyakin GL, et al. Among authors: ponomarev gv. Org Biomol Chem. 2021 Nov 3;19(42):9199-9210. doi: 10.1039/d1ob01626a. Org Biomol Chem. 2021. PMID: 34633024

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