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Population Genome Sequencing of the Scab Fungal Species Venturia inaequalis, Venturia pirina, Venturia aucupariae and Venturia asperata.
Le Cam B, Sargent D, Gouzy J, Amselem J, Bellanger MN, Bouchez O, Brown S, Caffier V, De Gracia M, Debuchy R, Duvaux L, Payen T, Sannier M, Shiller J, Collemare J, Lemaire C. Le Cam B, et al. Among authors: brown s. G3 (Bethesda). 2019 Aug 8;9(8):2405-2414. doi: 10.1534/g3.119.400047. G3 (Bethesda). 2019. PMID: 31253647 Free PMC article.
The genome of Theobroma cacao.
Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sallet E, Schiex T, Dievart A, Kramer M, Gelley L, Shi Z, Bérard A, Viot C, Boccara M, Risterucci AM, Guignon V, Sabau X, Axtell MJ, Ma Z, Zhang Y, Brown S, Bourge M, Golser W, Song X, Clement D, Rivallan R, Tahi M, Akaza JM, Pitollat B, Gramacho K, D'Hont A, Brunel D, Infante D, Kebe I, Costet P, Wing R, McCombie WR, Guiderdoni E, Quetier F, Panaud O, Wincker P, Bocs S, Lanaud C. Argout X, et al. Among authors: brown s. Nat Genet. 2011 Feb;43(2):101-8. doi: 10.1038/ng.736. Epub 2010 Dec 26. Nat Genet. 2011. PMID: 21186351
A phylogenetic framework of the legume genus Aeschynomene for comparative genetic analysis of the Nod-dependent and Nod-independent symbioses.
Brottier L, Chaintreuil C, Simion P, Scornavacca C, Rivallan R, Mournet P, Moulin L, Lewis GP, Fardoux J, Brown SC, Gomez-Pacheco M, Bourges M, Hervouet C, Gueye M, Duponnois R, Ramanankierana H, Randriambanona H, Vandrot H, Zabaleta M, DasGupta M, D'Hont A, Giraud E, Arrighi JF. Brottier L, et al. BMC Plant Biol. 2018 Dec 5;18(1):333. doi: 10.1186/s12870-018-1567-z. BMC Plant Biol. 2018. PMID: 30518342 Free PMC article.
Cabomba as a model for studies of early angiosperm evolution.
Vialette-Guiraud AC, Alaux M, Legeai F, Finet C, Chambrier P, Brown SC, Chauvet A, Magdalena C, Rudall PJ, Scutt CP. Vialette-Guiraud AC, et al. Ann Bot. 2011 Sep;108(4):589-98. doi: 10.1093/aob/mcr088. Epub 2011 Apr 12. Ann Bot. 2011. PMID: 21486926 Free PMC article. Review.
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.
D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengellé J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain MR, Leebens-Mack J, Burgess D, Freeling M, Mbéguié-A-Mbéguié D, Chabannes M, Wicker T, Panaud O, Barbosa J, Hribova E, Heslop-Harrison P, Habas R, Rivallan R, Francois P, Poiron C, Kilian A, Burthia D, Jenny C, Bakry F, Brown S, Guignon V, Kema G, Dita M, Waalwijk C, Joseph S, Dievart A, Jaillon O, Leclercq J, Argout X, Lyons E, Almeida A, Jeridi M, Dolezel J, Roux N, Risterucci AM, Weissenbach J, Ruiz M, Glaszmann JC, Quétier F, Yahiaoui N, Wincker P. D'Hont A, et al. Among authors: brown s. Nature. 2012 Aug 9;488(7410):213-7. doi: 10.1038/nature11241. Nature. 2012. PMID: 22801500 Free article.
Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how the global shift in expression ascribed to DNA ploidy influences RNA-Seq data normalization and interpretation.
Pirrello J, Deluche C, Frangne N, Gévaudant F, Maza E, Djari A, Bourge M, Renaudin JP, Brown S, Bowler C, Zouine M, Chevalier C, Gonzalez N. Pirrello J, et al. Among authors: brown s. Plant J. 2018 Jan;93(2):387-398. doi: 10.1111/tpj.13783. Plant J. 2018. PMID: 29172253 Free article.
The evolutionary dynamics of ancient and recent polyploidy in the African semiaquatic species of the legume genus Aeschynomene.
Chaintreuil C, Gully D, Hervouet C, Tittabutr P, Randriambanona H, Brown SC, Lewis GP, Bourge M, Cartieaux F, Boursot M, Ramanankierana H, D'Hont A, Teaumroong N, Giraud E, Arrighi JF. Chaintreuil C, et al. New Phytol. 2016 Aug;211(3):1077-91. doi: 10.1111/nph.13956. Epub 2016 Apr 7. New Phytol. 2016. PMID: 27061605 Free article.
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