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Farm-like indoor microbiota in non-farm homes protects children from asthma development.
Kirjavainen PV, Karvonen AM, Adams RI, Täubel M, Roponen M, Tuoresmäki P, Loss G, Jayaprakash B, Depner M, Ege MJ, Renz H, Pfefferle PI, Schaub B, Lauener R, Hyvärinen A, Knight R, Heederik DJJ, von Mutius E, Pekkanen J. Kirjavainen PV, et al. Among authors: knight r. Nat Med. 2019 Jul;25(7):1089-1095. doi: 10.1038/s41591-019-0469-4. Epub 2019 Jun 17. Nat Med. 2019. PMID: 31209334 Free PMC article.
Striped UniFrac: enabling microbiome analysis at unprecedented scale.
McDonald D, Vázquez-Baeza Y, Koslicki D, McClelland J, Reeve N, Xu Z, Gonzalez A, Knight R. McDonald D, et al. Among authors: knight r. Nat Methods. 2018 Nov;15(11):847-848. doi: 10.1038/s41592-018-0187-8. Nat Methods. 2018. PMID: 30377368 Free PMC article. No abstract available.
Author Correction: Farm-like indoor microbiota in non-farm homes protects children from asthma development.
Kirjavainen PV, Karvonen AM, Adams RI, Täubel M, Roponen M, Tuoresmäki P, Loss G, Jayaprakash B, Depner M, Ege MJ, Renz H, Pfefferle PI, Schaub B, Lauener R, Hyvärinen A, Knight R, Heederik DJJ, von Mutius E, Pekkanen J. Kirjavainen PV, et al. Among authors: knight r. Nat Med. 2019 Aug;25(8):1319. doi: 10.1038/s41591-019-0546-8. Nat Med. 2019. PMID: 31316162
Microbiome analyses of blood and tissues suggest cancer diagnostic approach.
Poore GD, Kopylova E, Zhu Q, Carpenter C, Fraraccio S, Wandro S, Kosciolek T, Janssen S, Metcalf J, Song SJ, Kanbar J, Miller-Montgomery S, Heaton R, Mckay R, Patel SP, Swafford AD, Knight R. Poore GD, et al. Among authors: knight r. Nature. 2020 Mar;579(7800):567-574. doi: 10.1038/s41586-020-2095-1. Epub 2020 Mar 11. Nature. 2020. Retraction in: Nature. 2024 Jul;631(8021):694. doi: 10.1038/s41586-024-07656-x PMID: 32214244 Free PMC article. Retracted.
A gut-derived metabolite alters brain activity and anxiety behaviour in mice.
Needham BD, Funabashi M, Adame MD, Wang Z, Boktor JC, Haney J, Wu WL, Rabut C, Ladinsky MS, Hwang SJ, Guo Y, Zhu Q, Griffiths JA, Knight R, Bjorkman PJ, Shapiro MG, Geschwind DH, Holschneider DP, Fischbach MA, Mazmanian SK. Needham BD, et al. Among authors: knight r. Nature. 2022 Feb;602(7898):647-653. doi: 10.1038/s41586-022-04396-8. Epub 2022 Feb 14. Nature. 2022. PMID: 35165440 Free PMC article.
Culturing: Looking it up in our gut.
Marotz C, Knight R. Marotz C, et al. Among authors: knight r. Nat Microbiol. 2016 Sep 27;1(10):16169. doi: 10.1038/nmicrobiol.2016.169. Nat Microbiol. 2016. PMID: 27670121 No abstract available.
Strains, functions and dynamics in the expanded Human Microbiome Project.
Lloyd-Price J, Mahurkar A, Rahnavard G, Crabtree J, Orvis J, Hall AB, Brady A, Creasy HH, McCracken C, Giglio MG, McDonald D, Franzosa EA, Knight R, White O, Huttenhower C. Lloyd-Price J, et al. Among authors: knight r. Nature. 2017 Oct 5;550(7674):61-66. doi: 10.1038/nature23889. Epub 2017 Sep 20. Nature. 2017. PMID: 28953883 Free PMC article.
3,444 results