Peng Z - Search Results

1

Protein contact prediction using metagenome sequence data and residual neural networks.

Wu Q, Peng Z, Anishchenko I, Cong Q, Baker D, Yang J. Wu Q, et al. Among authors: peng z. Bioinformatics. 2020 Jan 1;36(1):41-48. doi: 10.1093/bioinformatics/btz477. Bioinformatics. 2020. PMID: 31173061 Free PMC article.

2

Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation.

Yang JY, Peng ZL, Yu ZG, Zhang RJ, Anh V, Wang D. Yang JY, et al. J Theor Biol. 2009 Apr 21;257(4):618-26. doi: 10.1016/j.jtbi.2008.12.027. Epub 2009 Jan 8. J Theor Biol. 2009. PMID: 19183559

3

Prediction of protein structural classes for low-homology sequences based on predicted secondary structure.

Yang JY, Peng ZL, Chen X. Yang JY, et al. BMC Bioinformatics. 2010 Jan 18;11 Suppl 1(Suppl 1):S9. doi: 10.1186/1471-2105-11-S1-S9. BMC Bioinformatics. 2010. PMID: 20122246 Free PMC article.

4

An improved classification of G-protein-coupled receptors using sequence-derived features.

Peng ZL, Yang JY, Chen X. Peng ZL, et al. BMC Bioinformatics. 2010 Aug 9;11:420. doi: 10.1186/1471-2105-11-420. BMC Bioinformatics. 2010. PMID: 20696050 Free PMC article.

5

In various protein complexes, disordered protomers have large per-residue surface areas and area of protein-, DNA- and RNA-binding interfaces.

Wu Z, Hu G, Yang J, Peng Z, Uversky VN, Kurgan L. Wu Z, et al. Among authors: peng z. FEBS Lett. 2015 Sep 14;589(19 Pt A):2561-9. doi: 10.1016/j.febslet.2015.08.014. Epub 2015 Aug 20. FEBS Lett. 2015. PMID: 26297830 Free article.

6

A large-scale comparative assessment of methods for residue-residue contact prediction.

Wuyun Q, Zheng W, Peng Z, Yang J. Wuyun Q, et al. Among authors: peng z. Brief Bioinform. 2018 Mar 1;19(2):219-230. doi: 10.1093/bib/bbw106. Brief Bioinform. 2018. PMID: 27802931

7

An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier.

Xia J, Peng Z, Qi D, Mu H, Yang J. Xia J, et al. Among authors: peng z. Bioinformatics. 2017 Mar 15;33(6):863-870. doi: 10.1093/bioinformatics/btw768. Bioinformatics. 2017. PMID: 28039166

8

mTM-align: an algorithm for fast and accurate multiple protein structure alignment.

Dong R, Peng Z, Zhang Y, Yang J. Dong R, et al. Among authors: peng z. Bioinformatics. 2018 May 15;34(10):1719-1725. doi: 10.1093/bioinformatics/btx828. Bioinformatics. 2018. PMID: 29281009 Free PMC article.

9

CoABind: a novel algorithm for Coenzyme A (CoA)- and CoA derivatives-binding residues prediction.

Meng Q, Peng Z, Yang J. Meng Q, et al. Among authors: peng z. Bioinformatics. 2018 Aug 1;34(15):2598-2604. doi: 10.1093/bioinformatics/bty162. Bioinformatics. 2018. PMID: 29547921

10

mTM-align: a server for fast protein structure database search and multiple protein structure alignment.

Dong R, Pan S, Peng Z, Zhang Y, Yang J. Dong R, et al. Among authors: peng z. Nucleic Acids Res. 2018 Jul 2;46(W1):W380-W386. doi: 10.1093/nar/gky430. Nucleic Acids Res. 2018. PMID: 29788129 Free PMC article.

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