Sandberg TE - Search Results

1

Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism.

Cheng C, O'Brien EJ, McCloskey D, Utrilla J, Olson C, LaCroix RA, Sandberg TE, Feist AM, Palsson BO, King ZA. Cheng C, et al. Among authors: sandberg te. PLoS Comput Biol. 2019 Jun 3;15(6):e1007066. doi: 10.1371/journal.pcbi.1007066. eCollection 2019 Jun. PLoS Comput Biol. 2019. PMID: 31158228 Free PMC article.

2

Evolution of Escherichia coli to 42 °C and subsequent genetic engineering reveals adaptive mechanisms and novel mutations.

Sandberg TE, Pedersen M, LaCroix RA, Ebrahim A, Bonde M, Herrgard MJ, Palsson BO, Sommer M, Feist AM. Sandberg TE, et al. Mol Biol Evol. 2014 Oct;31(10):2647-62. doi: 10.1093/molbev/msu209. Epub 2014 Jul 10. Mol Biol Evol. 2014. PMID: 25015645 Free PMC article.

3

Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal medium.

LaCroix RA, Sandberg TE, O'Brien EJ, Utrilla J, Ebrahim A, Guzman GI, Szubin R, Palsson BO, Feist AM. LaCroix RA, et al. Among authors: sandberg te. Appl Environ Microbiol. 2015 Jan;81(1):17-30. doi: 10.1128/AEM.02246-14. Epub 2014 Oct 10. Appl Environ Microbiol. 2015. PMID: 25304508 Free PMC article.

4

Evolution of E. coli on [U-13C]Glucose Reveals a Negligible Isotopic Influence on Metabolism and Physiology.

Sandberg TE, Long CP, Gonzalez JE, Feist AM, Antoniewicz MR, Palsson BO. Sandberg TE, et al. PLoS One. 2016 Mar 10;11(3):e0151130. doi: 10.1371/journal.pone.0151130. eCollection 2016. PLoS One. 2016. PMID: 26964043 Free PMC article.

5

Laboratory Evolution to Alternating Substrate Environments Yields Distinct Phenotypic and Genetic Adaptive Strategies.

Sandberg TE, Lloyd CJ, Palsson BO, Feist AM. Sandberg TE, et al. Appl Environ Microbiol. 2017 Jun 16;83(13):e00410-17. doi: 10.1128/AEM.00410-17. Print 2017 Jul 1. Appl Environ Microbiol. 2017. PMID: 28455337 Free PMC article.

6

Adaptation to the coupling of glycolysis to toxic methylglyoxal production in tpiA deletion strains of Escherichia coli requires synchronized and counterintuitive genetic changes.

McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO. McCloskey D, et al. Among authors: sandberg te. Metab Eng. 2018 Jul;48:82-93. doi: 10.1016/j.ymben.2018.05.012. Epub 2018 May 26. Metab Eng. 2018. PMID: 29842925

7

Adaptive laboratory evolution resolves energy depletion to maintain high aromatic metabolite phenotypes in Escherichia coli strains lacking the Phosphotransferase System.

McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO. McCloskey D, et al. Among authors: sandberg te. Metab Eng. 2018 Jul;48:233-242. doi: 10.1016/j.ymben.2018.06.005. Epub 2018 Jun 15. Metab Eng. 2018. PMID: 29906504

8

Multiple Optimal Phenotypes Overcome Redox and Glycolytic Intermediate Metabolite Imbalances in Escherichia coli pgi Knockout Evolutions.

McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO. McCloskey D, et al. Among authors: sandberg te. Appl Environ Microbiol. 2018 Sep 17;84(19):e00823-18. doi: 10.1128/AEM.00823-18. Print 2018 Oct 1. Appl Environ Microbiol. 2018. PMID: 30054360 Free PMC article.

9

Growth Adaptation of gnd and sdhCB Escherichia coli Deletion Strains Diverges From a Similar Initial Perturbation of the Transcriptome.

McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO. McCloskey D, et al. Among authors: sandberg te. Front Microbiol. 2018 Aug 7;9:1793. doi: 10.3389/fmicb.2018.01793. eCollection 2018. Front Microbiol. 2018. PMID: 30131786 Free PMC article.

10

Evolution of gene knockout strains of E. coli reveal regulatory architectures governed by metabolism.

McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO. McCloskey D, et al. Among authors: sandberg te. Nat Commun. 2018 Sep 18;9(1):3796. doi: 10.1038/s41467-018-06219-9. Nat Commun. 2018. PMID: 30228271 Free PMC article.

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