Zeng X - Search Results

1

deepDR: a network-based deep learning approach to in silico drug repositioning.

Zeng X, Zhu S, Liu X, Zhou Y, Nussinov R, Cheng F. Zeng X, et al. Bioinformatics. 2019 Dec 15;35(24):5191-5198. doi: 10.1093/bioinformatics/btz418. Bioinformatics. 2019. PMID: 31116390 Free PMC article.

2

Using MOEA with Redistribution and Consensus Branches to Infer Phylogenies.

Min X, Zhang M, Yuan S, Ge S, Liu X, Zeng X, Xia N. Min X, et al. Among authors: zeng x. Int J Mol Sci. 2017 Dec 26;19(1):62. doi: 10.3390/ijms19010062. Int J Mol Sci. 2017. PMID: 29278391 Free PMC article.

3

Prediction of potential disease-associated microRNAs using structural perturbation method.

Zeng X, Liu L, Lü L, Zou Q. Zeng X, et al. Bioinformatics. 2018 Jul 15;34(14):2425-2432. doi: 10.1093/bioinformatics/bty112. Bioinformatics. 2018. PMID: 29490018

4

Prediction of Drug-Gene Interaction by Using Metapath2vec.

Zhu S, Bing J, Min X, Lin C, Zeng X. Zhu S, et al. Among authors: zeng x. Front Genet. 2018 Jul 31;9:248. doi: 10.3389/fgene.2018.00248. eCollection 2018. Front Genet. 2018. PMID: 30108606 Free PMC article.

5

Sequence clustering in bioinformatics: an empirical study.

Zou Q, Lin G, Jiang X, Liu X, Zeng X. Zou Q, et al. Among authors: zeng x. Brief Bioinform. 2020 Jan 17;21(1):1-10. doi: 10.1093/bib/bby090. Brief Bioinform. 2020. PMID: 30239587

6

Sc-ncDNAPred: A Sequence-Based Predictor for Identifying Non-coding DNA in Saccharomyces cerevisiae.

He W, Ju Y, Zeng X, Liu X, Zou Q. He W, et al. Among authors: zeng x. Front Microbiol. 2018 Sep 12;9:2174. doi: 10.3389/fmicb.2018.02174. eCollection 2018. Front Microbiol. 2018. PMID: 30258427 Free PMC article.

7

Computational methods for identifying the critical nodes in biological networks.

Liu X, Hong Z, Liu J, Lin Y, Rodríguez-Patón A, Zou Q, Zeng X. Liu X, et al. Among authors: zeng x. Brief Bioinform. 2020 Mar 23;21(2):486-497. doi: 10.1093/bib/bbz011. Brief Bioinform. 2020. PMID: 30753282 Review.

8

A component overlapping attribute clustering (COAC) algorithm for single-cell RNA sequencing data analysis and potential pathobiological implications.

Peng H, Zeng X, Zhou Y, Zhang D, Nussinov R, Cheng F. Peng H, et al. Among authors: zeng x. PLoS Comput Biol. 2019 Feb 19;15(2):e1006772. doi: 10.1371/journal.pcbi.1006772. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30779739 Free PMC article.

9

Learning to Predict Drug Target Interaction From Missing Not at Random Labels.

Lin C, Ni S, Liang Y, Zeng X, Liu X. Lin C, et al. Among authors: zeng x. IEEE Trans Nanobioscience. 2019 Jul;18(3):353-359. doi: 10.1109/TNB.2019.2909293. Epub 2019 Apr 9. IEEE Trans Nanobioscience. 2019. PMID: 30969929

10

Identifying enhancer-promoter interactions with neural network based on pre-trained DNA vectors and attention mechanism.

Hong Z, Zeng X, Wei L, Liu X. Hong Z, et al. Among authors: zeng x. Bioinformatics. 2020 Feb 15;36(4):1037-1043. doi: 10.1093/bioinformatics/btz694. Bioinformatics. 2020. PMID: 31588505

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