Qiu Y - Search Results

1

MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.

Juric I, Yu M, Abnousi A, Raviram R, Fang R, Zhao Y, Zhang Y, Qiu Y, Yang Y, Li Y, Ren B, Hu M. Juric I, et al. Among authors: qiu y. PLoS Comput Biol. 2019 Apr 15;15(4):e1006982. doi: 10.1371/journal.pcbi.1006982. eCollection 2019 Apr. PLoS Comput Biol. 2019. PMID: 30986246 Free PMC article.

2

Integrative analysis of haplotype-resolved epigenomes across human tissues.

Leung D, Jung I, Rajagopal N, Schmitt A, Selvaraj S, Lee AY, Yen CA, Lin S, Lin Y, Qiu Y, Xie W, Yue F, Hariharan M, Ray P, Kuan S, Edsall L, Yang H, Chi NC, Zhang MQ, Ecker JR, Ren B. Leung D, et al. Among authors: qiu y. Nature. 2015 Feb 19;518(7539):350-354. doi: 10.1038/nature14217. Nature. 2015. PMID: 25693566 Free PMC article.

3

Epigenetic priming of enhancers predicts developmental competence of hESC-derived endodermal lineage intermediates.

Wang A, Yue F, Li Y, Xie R, Harper T, Patel NA, Muth K, Palmer J, Qiu Y, Wang J, Lam DK, Raum JC, Stoffers DA, Ren B, Sander M. Wang A, et al. Among authors: qiu y. Cell Stem Cell. 2015 Apr 2;16(4):386-99. doi: 10.1016/j.stem.2015.02.013. Cell Stem Cell. 2015. PMID: 25842977 Free PMC article.

4

A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome.

Schmitt AD, Hu M, Jung I, Xu Z, Qiu Y, Tan CL, Li Y, Lin S, Lin Y, Barr CL, Ren B. Schmitt AD, et al. Among authors: qiu y. Cell Rep. 2016 Nov 15;17(8):2042-2059. doi: 10.1016/j.celrep.2016.10.061. Cell Rep. 2016. PMID: 27851967 Free PMC article.

5

A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells.

Diao Y, Fang R, Li B, Meng Z, Yu J, Qiu Y, Lin KC, Huang H, Liu T, Marina RJ, Jung I, Shen Y, Guan KL, Ren B. Diao Y, et al. Among authors: qiu y. Nat Methods. 2017 Jun;14(6):629-635. doi: 10.1038/nmeth.4264. Epub 2017 Apr 17. Nat Methods. 2017. PMID: 28417999 Free PMC article.

6

Histone H3 lysine 4 monomethylation modulates long-range chromatin interactions at enhancers.

Yan J, Chen SA, Local A, Liu T, Qiu Y, Dorighi KM, Preissl S, Rivera CM, Wang C, Ye Z, Ge K, Hu M, Wysocka J, Ren B. Yan J, et al. Among authors: qiu y. Cell Res. 2018 Feb;28(2):204-220. doi: 10.1038/cr.2018.1. Epub 2018 Jan 9. Cell Res. 2018. PMID: 29313530 Free PMC article.

7

Histone H3 lysine 4 monomethylation modulates long-range chromatin interactions at enhancers.

Yan J, Chen SA, Local A, Liu T, Qiu Y, Dorighi KM, Preissl S, Rivera CM, Wang C, Ye Z, Ge K, Hu M, Wysocka J, Ren B. Yan J, et al. Among authors: qiu y. Cell Res. 2018 Mar;28(3):387. doi: 10.1038/cr.2018.18. Cell Res. 2018. PMID: 29497152 Free PMC article.

8

The Hippo pathway effector proteins YAP and TAZ have both distinct and overlapping functions in the cell.

Plouffe SW, Lin KC, Moore JL 3rd, Tan FE, Ma S, Ye Z, Qiu Y, Ren B, Guan KL. Plouffe SW, et al. Among authors: qiu y. J Biol Chem. 2018 Jul 13;293(28):11230-11240. doi: 10.1074/jbc.RA118.002715. Epub 2018 May 25. J Biol Chem. 2018. PMID: 29802201 Free PMC article.

9

RAP2 mediates mechanoresponses of the Hippo pathway.

Meng Z, Qiu Y, Lin KC, Kumar A, Placone JK, Fang C, Wang KC, Lu S, Pan M, Hong AW, Moroishi T, Luo M, Plouffe SW, Diao Y, Ye Z, Park HW, Wang X, Yu FX, Chien S, Wang CY, Ren B, Engler AJ, Guan KL. Meng Z, et al. Among authors: qiu y. Nature. 2018 Aug;560(7720):655-660. doi: 10.1038/s41586-018-0444-0. Epub 2018 Aug 22. Nature. 2018. PMID: 30135582 Free PMC article.

10

Dynamic reorganization of the genome shapes the recombination landscape in meiotic prophase.

Patel L, Kang R, Rosenberg SC, Qiu Y, Raviram R, Chee S, Hu R, Ren B, Cole F, Corbett KD. Patel L, et al. Among authors: qiu y. Nat Struct Mol Biol. 2019 Mar;26(3):164-174. doi: 10.1038/s41594-019-0187-0. Epub 2019 Feb 18. Nat Struct Mol Biol. 2019. PMID: 30778236 Free PMC article.

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