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Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium.
Gu W, Yildirimman R, Van der Stuyft E, Verbeeck D, Herzinger S, Satagopam V, Barbosa-Silva A, Schneider R, Lange B, Lehrach H, Guo Y, Henderson D, Rowe A; IMI OncoTrack and the IMI eTRIKS consortia. Gu W, et al. Among authors: schneider r. BMC Bioinformatics. 2019 Apr 1;20(1):164. doi: 10.1186/s12859-019-2748-y. BMC Bioinformatics. 2019. PMID: 30935364 Free PMC article.
Arena3D: visualization of biological networks in 3D.
Pavlopoulos GA, O'Donoghue SI, Satagopam VP, Soldatos TG, Pafilis E, Schneider R. Pavlopoulos GA, et al. Among authors: schneider r. BMC Syst Biol. 2008 Nov 28;2:104. doi: 10.1186/1752-0509-2-104. BMC Syst Biol. 2008. PMID: 19040715 Free PMC article.
Martini: using literature keywords to compare gene sets.
Soldatos TG, O'Donoghue SI, Satagopam VP, Jensen LJ, Brown NP, Barbosa-Silva A, Schneider R. Soldatos TG, et al. Among authors: schneider r. Nucleic Acids Res. 2010 Jan;38(1):26-38. doi: 10.1093/nar/gkp876. Epub 2009 Oct 25. Nucleic Acids Res. 2010. PMID: 19858102 Free PMC article.
A reference guide for tree analysis and visualization.
Pavlopoulos GA, Soldatos TG, Barbosa-Silva A, Schneider R. Pavlopoulos GA, et al. Among authors: schneider r. BioData Min. 2010 Feb 22;3(1):1. doi: 10.1186/1756-0381-3-1. BioData Min. 2010. PMID: 20175922 Free PMC article.
Caipirini: using gene sets to rank literature.
Soldatos TG, O'Donoghue SI, Satagopam VP, Barbosa-Silva A, Pavlopoulos GA, Wanderley-Nogueira AC, Soares-Cavalcanti NM, Schneider R. Soldatos TG, et al. Among authors: schneider r. BioData Min. 2012 Feb 1;5(1):1. doi: 10.1186/1756-0381-5-1. BioData Min. 2012. PMID: 22297131 Free PMC article.
3,979 results