Martin LS - Search Results

1

Systematic benchmarking of omics computational tools.

Mangul S, Martin LS, Hill BL, Lam AK, Distler MG, Zelikovsky A, Eskin E, Flint J. Mangul S, et al. Among authors: martin ls. Nat Commun. 2019 Mar 27;10(1):1393. doi: 10.1038/s41467-019-09406-4. Nat Commun. 2019. PMID: 30918265 Free PMC article. Review.

2

Challenges and recommendations to improve the installability and archival stability of omics computational tools.

Mangul S, Mosqueiro T, Abdill RJ, Duong D, Mitchell K, Sarwal V, Hill B, Brito J, Littman RJ, Statz B, Lam AK, Dayama G, Grieneisen L, Martin LS, Flint J, Eskin E, Blekhman R. Mangul S, et al. Among authors: martin ls. PLoS Biol. 2019 Jun 20;17(6):e3000333. doi: 10.1371/journal.pbio.3000333. eCollection 2019 Jun. PLoS Biol. 2019. PMID: 31220077 Free PMC article.

3

Improving the usability and archival stability of bioinformatics software.

Mangul S, Martin LS, Eskin E, Blekhman R. Mangul S, et al. Among authors: martin ls. Genome Biol. 2019 Feb 27;20(1):47. doi: 10.1186/s13059-019-1649-8. Genome Biol. 2019. PMID: 30813962 Free PMC article.

4

Benchmarking of computational error-correction methods for next-generation sequencing data.

Mitchell K, Brito JJ, Mandric I, Wu Q, Knyazev S, Chang S, Martin LS, Karlsberg A, Gerasimov E, Littman R, Hill BL, Wu NC, Yang HT, Hsieh K, Chen L, Littman E, Shabani T, Enik G, Yao D, Sun R, Schroeder J, Eskin E, Zelikovsky A, Skums P, Pop M, Mangul S. Mitchell K, et al. Among authors: martin ls. Genome Biol. 2020 Mar 17;21(1):71. doi: 10.1186/s13059-020-01988-3. Genome Biol. 2020. PMID: 32183840 Free PMC article.

5

Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX.

Mangul S, Martin LS, Hoffmann A, Pellegrini M, Eskin E. Mangul S, et al. Among authors: martin ls. Trends Biotechnol. 2017 Oct;35(10):901-903. doi: 10.1016/j.tibtech.2017.06.007. Epub 2017 Jul 15. Trends Biotechnol. 2017. PMID: 28720283

6

Involving undergraduates in genomics research to narrow the education-research gap.

Mangul S, Martin LS, Eskin E. Mangul S, et al. Among authors: martin ls. Nat Biotechnol. 2018 Apr 5;36(4):369-371. doi: 10.1038/nbt.4113. Nat Biotechnol. 2018. PMID: 29621227 No abstract available.

7

How bioinformatics and open data can boost basic science in countries and universities with limited resources.

Mangul S, Martin LS, Langmead B, Sanchez-Galan JE, Toma I, Hormozdiari F, Pevzner P, Eskin E. Mangul S, et al. Among authors: martin ls. Nat Biotechnol. 2019 Mar;37(3):324-326. doi: 10.1038/s41587-019-0053-y. Nat Biotechnol. 2019. PMID: 30833765 No abstract available.

8

Telescope: an interactive tool for managing large-scale analysis from mobile devices.

Brito JJ, Mosqueiro T, Rotman J, Xue V, Chapski DJ, la Hoz J, Matias P, Martin LS, Zelikovsky A, Pellegrini M, Mangul S. Brito JJ, et al. Among authors: martin ls. Gigascience. 2020 Jan 1;9(1):giz163. doi: 10.1093/gigascience/giz163. Gigascience. 2020. PMID: 31972019 Free PMC article.

9

Improving the usability and comprehensiveness of microbial databases.

Loeffler C, Karlsberg A, Martin LS, Eskin E, Koslicki D, Mangul S. Loeffler C, et al. Among authors: martin ls. BMC Biol. 2020 Apr 7;18(1):37. doi: 10.1186/s12915-020-0756-z. BMC Biol. 2020. PMID: 32264902 Free PMC article.

10

Population structure in genetic studies: Confounding factors and mixed models.

Sul JH, Martin LS, Eskin E. Sul JH, et al. Among authors: martin ls. PLoS Genet. 2018 Dec 27;14(12):e1007309. doi: 10.1371/journal.pgen.1007309. eCollection 2018 Dec. PLoS Genet. 2018. PMID: 30589851 Free PMC article. Review.

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