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Page 1
Cell competition during reprogramming gives rise to dominant clones.
Shakiba N, Fahmy A, Jayakumaran G, McGibbon S, David L, Trcka D, Elbaz J, Puri MC, Nagy A, van der Kooy D, Goyal S, Wrana JL, Zandstra PW. Shakiba N, et al. Among authors: jayakumaran g. Science. 2019 Apr 26;364(6438):eaan0925. doi: 10.1126/science.aan0925. Epub 2019 Mar 21. Science. 2019. PMID: 30898844
Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming.
Hirsch CL, Coban Akdemir Z, Wang L, Jayakumaran G, Trcka D, Weiss A, Hernandez JJ, Pan Q, Han H, Xu X, Xia Z, Salinger AP, Wilson M, Vizeacoumar F, Datti A, Li W, Cooney AJ, Barton MC, Blencowe BJ, Wrana JL, Dent SY. Hirsch CL, et al. Among authors: jayakumaran g. Genes Dev. 2015 Apr 15;29(8):803-16. doi: 10.1101/gad.255109.114. Epub 2015 Apr 15. Genes Dev. 2015. PMID: 25877919 Free PMC article.
Corrigendum: Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming.
Hirsch CL, Akdemir ZC, Wang L, Jayakumaran G, Trcka D, Weiss A, Hernandez JJ, Pan Q, Han H, Xu X, Xia Z, Salinger AP, Wilson M, Vizeacoumar F, Datti A, Li W, Cooney AJ, Barton MC, Blencowe BJ, Wrana JL, Dent SY. Hirsch CL, et al. Among authors: jayakumaran g. Genes Dev. 2015 Jun 15;29(12):1341. doi: 10.1101/gad.266601.115. Genes Dev. 2015. PMID: 26109054 Free PMC article. No abstract available.
Endocannabinoids and diacylglycerol kinase activity.
Gantayet A, Jegatheswaran J, Jayakumaran G, Topham MK, Epand RM. Gantayet A, et al. Among authors: jayakumaran g. Biochim Biophys Acta. 2011 Apr;1808(4):1050-3. doi: 10.1016/j.bbamem.2010.12.022. Epub 2010 Dec 29. Biochim Biophys Acta. 2011. PMID: 21194521 Free PMC article.
A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing.
Ziegler J, Hechtman JF, Rana S, Ptashkin RN, Jayakumaran G, Middha S, Chavan SS, Vanderbilt C, DeLair D, Casanova J, Shia J, DeGroat N, Benayed R, Ladanyi M, Berger MF, Fuchs TJ, Brannon AR, Zehir A. Ziegler J, et al. Among authors: jayakumaran g. Nat Commun. 2025 Jan 2;16(1):136. doi: 10.1038/s41467-024-54970-z. Nat Commun. 2025. PMID: 39746944 Free PMC article.
Diffuse Pleural Mesotheliomas with Genomic Near-Haploidization: A Newly Recognized Subset with Distinct Clinical, Histologic, and Molecular Features.
Yang SR, Jayakumaran G, Benhamida J, Febres-Aldana CA, Fanaroff R, Chang J, Gedvilaite E, Villafania LB, Sauter JL, Offin M, Zauderer MG, Ladanyi M. Yang SR, et al. Among authors: jayakumaran g. Clin Cancer Res. 2024 Jul 1;30(13):2780-2789. doi: 10.1158/1078-0432.CCR-24-0085. Clin Cancer Res. 2024. PMID: 38630790 Free PMC article.
Enhanced clinical assessment of hematologic malignancies through routine paired tumor and normal sequencing.
Ptashkin RN, Ewalt MD, Jayakumaran G, Kiecka I, Bowman AS, Yao J, Casanova J, Lin YD, Petrova-Drus K, Mohanty AS, Bacares R, Benhamida J, Rana S, Razumova A, Vanderbilt C, Balakrishnan Rema A, Rijo I, Son-Garcia J, de Bruijn I, Zhu M, Lachhander S, Wang W, Haque MS, Seshan VE, Wang J, Liu Y, Nafa K, Borsu L, Zhang Y, Aypar U, Suehnholz SP, Chakravarty D, Park JH, Abdel-Wahab O, Mato AR, Xiao W, Roshal M, Yabe M, Batlevi CL, Giralt S, Salles G, Rampal R, Tallman M, Stein EM, Younes A, Levine RL, Perales MA, van den Brink MRM, Dogan A, Ladanyi M, Berger MF, Brannon AR, Benayed R, Zehir A, Arcila ME. Ptashkin RN, et al. Among authors: jayakumaran g. Nat Commun. 2023 Oct 28;14(1):6895. doi: 10.1038/s41467-023-42585-9. Nat Commun. 2023. PMID: 37898613 Free PMC article.
Mutant-RB1 circulating tumor DNA in the blood of unilateral retinoblastoma patients: What happens during enucleation surgery: A pilot study.
Abramson DH, Mandelker DL, Brannon AR, Dunkel IJ, Benayed R, Berger MF, Arcila ME, Ladanyi M, Friedman DN, Jayakumaran G, Diosdado MS, Robbins MA, Haggag-Lindgren D, Shukla N, Walsh MF, Kothari P, Tsui DWY, Francis JH. Abramson DH, et al. Among authors: jayakumaran g. PLoS One. 2023 Feb 3;18(2):e0271505. doi: 10.1371/journal.pone.0271505. eCollection 2023. PLoS One. 2023. PMID: 36735656 Free PMC article.
38 results