Lyon D - Search Results

1

Analysis of human acetylation stoichiometry defines mechanistic constraints on protein regulation.

Hansen BK, Gupta R, Baldus L, Lyon D, Narita T, Lammers M, Choudhary C, Weinert BT. Hansen BK, et al. Among authors: lyon d. Nat Commun. 2019 Mar 5;10(1):1055. doi: 10.1038/s41467-019-09024-0. Nat Commun. 2019. PMID: 30837475 Free PMC article.

2

Avoiding abundance bias in the functional annotation of post-translationally modified proteins.

Schölz C, Lyon D, Refsgaard JC, Jensen LJ, Choudhary C, Weinert BT. Schölz C, et al. Among authors: lyon d. Nat Methods. 2015 Nov;12(11):1003-4. doi: 10.1038/nmeth.3621. Nat Methods. 2015. PMID: 26513550 No abstract available.

3

Accurate Quantification of Site-specific Acetylation Stoichiometry Reveals the Impact of Sirtuin Deacetylase CobB on the E. coli Acetylome.

Weinert BT, Satpathy S, Hansen BK, Lyon D, Jensen LJ, Choudhary C. Weinert BT, et al. Among authors: lyon d. Mol Cell Proteomics. 2017 May;16(5):759-769. doi: 10.1074/mcp.M117.067587. Epub 2017 Mar 2. Mol Cell Proteomics. 2017. PMID: 28254776 Free PMC article.

4

Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

Hendriks IA, Lyon D, Young C, Jensen LJ, Vertegaal AC, Nielsen ML. Hendriks IA, et al. Among authors: lyon d. Nat Struct Mol Biol. 2017 Mar;24(3):325-336. doi: 10.1038/nsmb.3366. Epub 2017 Jan 23. Nat Struct Mol Biol. 2017. PMID: 28112733

5

Site-specific characterization of endogenous SUMOylation across species and organs.

Hendriks IA, Lyon D, Su D, Skotte NH, Daniel JA, Jensen LJ, Nielsen ML. Hendriks IA, et al. Among authors: lyon d. Nat Commun. 2018 Jun 25;9(1):2456. doi: 10.1038/s41467-018-04957-4. Nat Commun. 2018. PMID: 29942033 Free PMC article.

6

Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells.

Larsen SC, Sylvestersen KB, Mund A, Lyon D, Mullari M, Madsen MV, Daniel JA, Jensen LJ, Nielsen ML. Larsen SC, et al. Among authors: lyon d. Sci Signal. 2016 Aug 30;9(443):rs9. doi: 10.1126/scisignal.aaf7329. Sci Signal. 2016. PMID: 27577262

7

Quantitative metaproteomics of medieval dental calculus reveals individual oral health status.

Jersie-Christensen RR, Lanigan LT, Lyon D, Mackie M, Belstrøm D, Kelstrup CD, Fotakis AK, Willerslev E, Lynnerup N, Jensen LJ, Cappellini E, Olsen JV. Jersie-Christensen RR, et al. Among authors: lyon d. Nat Commun. 2018 Nov 20;9(1):4744. doi: 10.1038/s41467-018-07148-3. Nat Commun. 2018. PMID: 30459334 Free PMC article.

8

Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny.

Cappellini E, Welker F, Pandolfi L, Ramos-Madrigal J, Samodova D, Rüther PL, Fotakis AK, Lyon D, Moreno-Mayar JV, Bukhsianidze M, Rakownikow Jersie-Christensen R, Mackie M, Ginolhac A, Ferring R, Tappen M, Palkopoulou E, Dickinson MR, Stafford TW Jr, Chan YL, Götherström A, Nathan SKSS, Heintzman PD, Kapp JD, Kirillova I, Moodley Y, Agusti J, Kahlke RD, Kiladze G, Martínez-Navarro B, Liu S, Sandoval Velasco M, Sinding MS, Kelstrup CD, Allentoft ME, Orlando L, Penkman K, Shapiro B, Rook L, Dalén L, Gilbert MTP, Olsen JV, Lordkipanidze D, Willerslev E. Cappellini E, et al. Among authors: lyon d. Nature. 2019 Oct;574(7776):103-107. doi: 10.1038/s41586-019-1555-y. Epub 2019 Sep 11. Nature. 2019. PMID: 31511700 Free PMC article.

9

Specifying RNA-Binding Regions in Proteins by Peptide Cross-Linking and Affinity Purification.

Mullari M, Lyon D, Jensen LJ, Nielsen ML. Mullari M, et al. Among authors: lyon d. J Proteome Res. 2017 Aug 4;16(8):2762-2772. doi: 10.1021/acs.jproteome.7b00042. Epub 2017 Jul 7. J Proteome Res. 2017. PMID: 28648085

10

Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation.

Larsen SC, Hendriks IA, Lyon D, Jensen LJ, Nielsen ML. Larsen SC, et al. Among authors: lyon d. Cell Rep. 2018 Aug 28;24(9):2493-2505.e4. doi: 10.1016/j.celrep.2018.07.083. Cell Rep. 2018. PMID: 30157440 Free article.

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