Song CX - Search Results

1

Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution.

Liu Y, Siejka-Zielińska P, Velikova G, Bi Y, Yuan F, Tomkova M, Bai C, Chen L, Schuster-Böckler B, Song CX. Liu Y, et al. Among authors: song cx. Nat Biotechnol. 2019 Apr;37(4):424-429. doi: 10.1038/s41587-019-0041-2. Epub 2019 Feb 25. Nat Biotechnol. 2019. PMID: 30804537

2

Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine.

Song CX, Szulwach KE, Fu Y, Dai Q, Yi C, Li X, Li Y, Chen CH, Zhang W, Jian X, Wang J, Zhang L, Looney TJ, Zhang B, Godley LA, Hicks LM, Lahn BT, Jin P, He C. Song CX, et al. Nat Biotechnol. 2011 Jan;29(1):68-72. doi: 10.1038/nbt.1732. Epub 2010 Dec 12. Nat Biotechnol. 2011. PMID: 21151123 Free PMC article.

3

Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine.

Song CX, Clark TA, Lu XY, Kislyuk A, Dai Q, Turner SW, He C, Korlach J. Song CX, et al. Nat Methods. 2011 Nov 20;9(1):75-7. doi: 10.1038/nmeth.1779. Nat Methods. 2011. PMID: 22101853 Free PMC article.

4

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

Yu M, Hon GC, Szulwach KE, Song CX, Zhang L, Kim A, Li X, Dai Q, Shen Y, Park B, Min JH, Jin P, Ren B, He C. Yu M, et al. Among authors: song cx. Cell. 2012 Jun 8;149(6):1368-80. doi: 10.1016/j.cell.2012.04.027. Epub 2012 May 17. Cell. 2012. PMID: 22608086 Free PMC article.

5

Mapping recently identified nucleotide variants in the genome and transcriptome.

Song CX, Yi C, He C. Song CX, et al. Nat Biotechnol. 2012 Nov;30(11):1107-16. doi: 10.1038/nbt.2398. Nat Biotechnol. 2012. PMID: 23138310 Free PMC article. Review.

6

Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine.

Yu M, Hon GC, Szulwach KE, Song CX, Jin P, Ren B, He C. Yu M, et al. Among authors: song cx. Nat Protoc. 2012 Dec;7(12):2159-70. doi: 10.1038/nprot.2012.137. Epub 2012 Nov 29. Nat Protoc. 2012. PMID: 23196972 Free PMC article.

7

Tet-mediated covalent labelling of 5-methylcytosine for its genome-wide detection and sequencing.

Zhang L, Szulwach KE, Hon GC, Song CX, Park B, Yu M, Lu X, Dai Q, Wang X, Street CR, Tan H, Min JH, Ren B, Jin P, He C. Zhang L, et al. Among authors: song cx. Nat Commun. 2013;4:1517. doi: 10.1038/ncomms2527. Nat Commun. 2013. PMID: 23443545 Free PMC article.

8

Quantitation and mapping of the epigenetic marker 5-hydroxymethylcytosine.

Qing Y, Tian Z, Bi Y, Wang Y, Long J, Song CX, Diao J. Qing Y, et al. Among authors: song cx. Bioessays. 2017 May;39(5). doi: 10.1002/bies.201700010. Epub 2017 Mar 23. Bioessays. 2017. PMID: 28332209 Review.

9

5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages.

Song CX, Yin S, Ma L, Wheeler A, Chen Y, Zhang Y, Liu B, Xiong J, Zhang W, Hu J, Zhou Z, Dong B, Tian Z, Jeffrey SS, Chua MS, So S, Li W, Wei Y, Diao J, Xie D, Quake SR. Song CX, et al. Cell Res. 2017 Oct;27(10):1231-1242. doi: 10.1038/cr.2017.106. Epub 2017 Aug 18. Cell Res. 2017. PMID: 28820176 Free PMC article.

10

Glucose and glutamine availability regulate HepG2 transcriptional responses to low oxygen.

Lai AG, Forde D, Chang WH, Yuan F, Zhuang X, Orbegozo Rubio C, Song CX, McKeating JA. Lai AG, et al. Among authors: song cx. Wellcome Open Res. 2018 Sep 26;3:126. doi: 10.12688/wellcomeopenres.14839.1. eCollection 2018. Wellcome Open Res. 2018. PMID: 30345392 Free PMC article.

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