Bickhart DM - Search Results

1

Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity.

Low WY, Tearle R, Bickhart DM, Rosen BD, Kingan SB, Swale T, Thibaud-Nissen F, Murphy TD, Young R, Lefevre L, Hume DA, Collins A, Ajmone-Marsan P, Smith TPL, Williams JL. Low WY, et al. Among authors: bickhart dm. Nat Commun. 2019 Jan 16;10(1):260. doi: 10.1038/s41467-018-08260-0. Nat Commun. 2019. PMID: 30651564 Free PMC article.

2

Fine mapping for Weaver syndrome in Brown Swiss cattle and the identification of 41 concordant mutations across NRCAM, PNPLA8 and CTTNBP2.

McClure M, Kim E, Bickhart D, Null D, Cooper T, Cole J, Wiggans G, Ajmone-Marsan P, Colli L, Santus E, Liu GE, Schroeder S, Matukumalli L, Van Tassell C, Sonstegard T. McClure M, et al. PLoS One. 2013;8(3):e59251. doi: 10.1371/journal.pone.0059251. Epub 2013 Mar 20. PLoS One. 2013. PMID: 23527149 Free PMC article.

3

Revealing misassembled segments in the bovine reference genome by high resolution linkage disequilibrium scan.

Utsunomiya AT, Santos DJ, Boison SA, Utsunomiya YT, Milanesi M, Bickhart DM, Ajmone-Marsan P, Sölkner J, Garcia JF, da Fonseca R, da Silva MV. Utsunomiya AT, et al. Among authors: bickhart dm. BMC Genomics. 2016 Sep 5;17(1):705. doi: 10.1186/s12864-016-3049-8. BMC Genomics. 2016. PMID: 27595709 Free PMC article.

4

The evolution of the natural killer complex; a comparison between mammals using new high-quality genome assemblies and targeted annotation.

Schwartz JC, Gibson MS, Heimeier D, Koren S, Phillippy AM, Bickhart DM, Smith TP, Medrano JF, Hammond JA. Schwartz JC, et al. Among authors: bickhart dm. Immunogenetics. 2017 Apr;69(4):255-269. doi: 10.1007/s00251-017-0973-y. Epub 2017 Feb 9. Immunogenetics. 2017. PMID: 28180967 Free PMC article.

5

Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.

Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP. Bickhart DM, et al. Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6. Nat Genet. 2017. PMID: 28263316 Free PMC article.

6

Scaffolding of long read assemblies using long range contact information.

Ghurye J, Pop M, Koren S, Bickhart D, Chin CS. Ghurye J, et al. BMC Genomics. 2017 Jul 12;18(1):527. doi: 10.1186/s12864-017-3879-z. BMC Genomics. 2017. PMID: 28701198 Free PMC article.

7

The antibody loci of the domestic goat (Capra hircus).

Schwartz JC, Philp RL, Bickhart DM, Smith TPL, Hammond JA. Schwartz JC, et al. Among authors: bickhart dm. Immunogenetics. 2018 May;70(5):317-326. doi: 10.1007/s00251-017-1033-3. Epub 2017 Oct 23. Immunogenetics. 2018. PMID: 29063126 Free PMC article.

8

Comparative sequence alignment reveals River Buffalo genomic structural differences compared with cattle.

Li W, Bickhart DM, Ramunno L, Iamartino D, Williams JL, Liu GE. Li W, et al. Among authors: bickhart dm. Genomics. 2019 May;111(3):418-425. doi: 10.1016/j.ygeno.2018.02.018. Epub 2018 Mar 6. Genomics. 2019. PMID: 29501677 Free article.

9

Comparative whole genome DNA methylation profiling of cattle sperm and somatic tissues reveals striking hypomethylated patterns in sperm.

Zhou Y, Connor EE, Bickhart DM, Li C, Baldwin RL, Schroeder SG, Rosen BD, Yang L, Van Tassell CP, Liu GE. Zhou Y, et al. Among authors: bickhart dm. Gigascience. 2018 May 1;7(5):giy039. doi: 10.1093/gigascience/giy039. Gigascience. 2018. PMID: 29635292 Free PMC article.

10

Genomic structural differences between cattle and River Buffalo identified through comparative genomic and transcriptomic analysis.

Li W, Bickhart DM, Ramunno L, Iamartino D, Williams JL, Liu GE. Li W, et al. Among authors: bickhart dm. Data Brief. 2018 May 10;19:236-239. doi: 10.1016/j.dib.2018.05.015. eCollection 2018 Aug. Data Brief. 2018. PMID: 29892639 Free PMC article.

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