Satas G - Search Results

1

The Clonal Evolution of Metastatic Osteosarcoma as Shaped by Cisplatin Treatment.

Brady SW, Ma X, Bahrami A, Satas G, Wu G, Newman S, Rusch M, Putnam DK, Mulder HL, Yergeau DA, Edmonson MN, Easton J, Alexandrov LB, Chen X, Mardis ER, Wilson RK, Downing JR, Pappo AS, Raphael BJ, Dyer MA, Zhang J. Brady SW, et al. Among authors: satas g. Mol Cancer Res. 2019 Apr;17(4):895-906. doi: 10.1158/1541-7786.MCR-18-0620. Epub 2019 Jan 16. Mol Cancer Res. 2019. PMID: 30651371 Free PMC article.

2

Quantifying tumor heterogeneity in whole-genome and whole-exome sequencing data.

Oesper L, Satas G, Raphael BJ. Oesper L, et al. Among authors: satas g. Bioinformatics. 2014 Dec 15;30(24):3532-40. doi: 10.1093/bioinformatics/btu651. Epub 2014 Oct 8. Bioinformatics. 2014. PMID: 25297070 Free PMC article.

3

Tumor phylogeny inference using tree-constrained importance sampling.

Satas G, Raphael BJ. Satas G, et al. Bioinformatics. 2017 Jul 15;33(14):i152-i160. doi: 10.1093/bioinformatics/btx270. Bioinformatics. 2017. PMID: 28882002 Free PMC article.

4

Inferring parsimonious migration histories for metastatic cancers.

El-Kebir M, Satas G, Raphael BJ. El-Kebir M, et al. Among authors: satas g. Nat Genet. 2018 May;50(5):718-726. doi: 10.1038/s41588-018-0106-z. Epub 2018 Apr 26. Nat Genet. 2018. PMID: 29700472 Free PMC article.

5

Haplotype phasing in single-cell DNA-sequencing data.

Satas G, Raphael BJ. Satas G, et al. Bioinformatics. 2018 Jul 1;34(13):i211-i217. doi: 10.1093/bioinformatics/bty286. Bioinformatics. 2018. PMID: 29950014 Free PMC article.

6

CALDER: Inferring Phylogenetic Trees from Longitudinal Tumor Samples.

Myers MA, Satas G, Raphael BJ. Myers MA, et al. Among authors: satas g. Cell Syst. 2019 Jun 26;8(6):514-522.e5. doi: 10.1016/j.cels.2019.05.010. Epub 2019 Jun 19. Cell Syst. 2019. PMID: 31229560 Free PMC article.

7

DeCiFering the elusive cancer cell fraction in tumor heterogeneity and evolution.

Satas G, Zaccaria S, El-Kebir M, Raphael BJ. Satas G, et al. Cell Syst. 2021 Oct 20;12(10):1004-1018.e10. doi: 10.1016/j.cels.2021.07.006. Epub 2021 Aug 19. Cell Syst. 2021. PMID: 34416171 Free PMC article.

8

Inferring the Mutational History of a Tumor Using Multi-state Perfect Phylogeny Mixtures.

El-Kebir M, Satas G, Oesper L, Raphael BJ. El-Kebir M, et al. Among authors: satas g. Cell Syst. 2016 Jul;3(1):43-53. doi: 10.1016/j.cels.2016.07.004. Cell Syst. 2016. PMID: 27467246 Free article.

9

SCARLET: Single-cell tumor phylogeny inference with copy-number constrained mutation losses.

Satas G, Zaccaria S, Mon G, Raphael BJ. Satas G, et al. Cell Syst. 2020 Apr 22;10(4):323-332.e8. doi: 10.1016/j.cels.2020.04.001. Cell Syst. 2020. PMID: 32864481 Free PMC article.

10

Tracking clonal evolution of drug resistance in ovarian cancer patients by exploiting structural variants in cfDNA.

Williams MJ, Vázquez-García I, Tam G, Wu M, Varice N, Havasov E, Shi H, Satas G, Lees HJ, Lee JJ, Myers MA, Zatzman M, Rusk N, Ali E, Shah RH, Berger MF, Mohibullah N, Lakhman Y, Chi DS, Abu-Rustum NR, Aghajanian C, McPherson A, Zamarin D, Loomis B, Weigelt B, Friedman CF, Shah SP. Williams MJ, et al. Among authors: satas g. bioRxiv [Preprint]. 2024 Aug 23:2024.08.21.609031. doi: 10.1101/2024.08.21.609031. bioRxiv. 2024. PMID: 39229105 Free PMC article. Preprint.

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