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Organoid single cell profiling identifies a transcriptional signature of glomerular disease.
Harder JL, Menon R, Otto EA, Zhou J, Eddy S, Wys NL, O'Connor C, Luo J, Nair V, Cebrian C, Spence JR, Bitzer M, Troyanskaya OG, Hodgin JB, Wiggins RC, Freedman BS, Kretzler M; European Renal cDNA Bank (ERCB); Nephrotic Syndrome Study Network (NEPTUNE). Harder JL, et al. Among authors: troyanskaya og. JCI Insight. 2019 Jan 10;4(1):e122697. doi: 10.1172/jci.insight.122697. JCI Insight. 2019. PMID: 30626756 Free PMC article.
Defining cell-type specificity at the transcriptional level in human disease.
Ju W, Greene CS, Eichinger F, Nair V, Hodgin JB, Bitzer M, Lee YS, Zhu Q, Kehata M, Li M, Jiang S, Rastaldi MP, Cohen CD, Troyanskaya OG, Kretzler M. Ju W, et al. Among authors: troyanskaya og. Genome Res. 2013 Nov;23(11):1862-73. doi: 10.1101/gr.155697.113. Epub 2013 Aug 15. Genome Res. 2013. PMID: 23950145 Free PMC article.
Global quantitative modeling of chromatin factor interactions.
Zhou J, Troyanskaya OG. Zhou J, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2014 Mar 27;10(3):e1003525. doi: 10.1371/journal.pcbi.1003525. eCollection 2014 Mar. PLoS Comput Biol. 2014. PMID: 24675896 Free PMC article.
Selene: a PyTorch-based deep learning library for sequence data.
Chen KM, Cofer EM, Zhou J, Troyanskaya OG. Chen KM, et al. Among authors: troyanskaya og. Nat Methods. 2019 Apr;16(4):315-318. doi: 10.1038/s41592-019-0360-8. Epub 2019 Mar 28. Nat Methods. 2019. PMID: 30923381 Free PMC article.
Machine learning, the kidney, and genotype-phenotype analysis.
Sealfon RSG, Mariani LH, Kretzler M, Troyanskaya OG. Sealfon RSG, et al. Among authors: troyanskaya og. Kidney Int. 2020 Jun;97(6):1141-1149. doi: 10.1016/j.kint.2020.02.028. Epub 2020 Apr 1. Kidney Int. 2020. PMID: 32359808 Free PMC article. Review.
176 results