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Models of polymer physics for the architecture of the cell nucleus.
Esposito A, Annunziatella C, Bianco S, Chiariello AM, Fiorillo L, Nicodemi M. Esposito A, et al. Among authors: annunziatella c. Wiley Interdiscip Rev Syst Biol Med. 2019 Jul;11(4):e1444. doi: 10.1002/wsbm.1444. Epub 2018 Dec 19. Wiley Interdiscip Rev Syst Biol Med. 2019. PMID: 30566285 Free PMC article. Review.
Polymer physics of chromosome large-scale 3D organisation.
Chiariello AM, Annunziatella C, Bianco S, Esposito A, Nicodemi M. Chiariello AM, et al. Among authors: annunziatella c. Sci Rep. 2016 Jul 13;6:29775. doi: 10.1038/srep29775. Sci Rep. 2016. PMID: 27405443 Free PMC article.
Polymer Physics of the Large-Scale Structure of Chromatin.
Bianco S, Chiariello AM, Annunziatella C, Esposito A, Nicodemi M. Bianco S, et al. Among authors: annunziatella c. Methods Mol Biol. 2016;1480:201-6. doi: 10.1007/978-1-4939-6380-5_17. Methods Mol Biol. 2016. PMID: 27659986
Predicting chromatin architecture from models of polymer physics.
Bianco S, Chiariello AM, Annunziatella C, Esposito A, Nicodemi M. Bianco S, et al. Among authors: annunziatella c. Chromosome Res. 2017 Mar;25(1):25-34. doi: 10.1007/s10577-016-9545-5. Epub 2017 Jan 9. Chromosome Res. 2017. PMID: 28070687 Review.
Polymer physics predicts the effects of structural variants on chromatin architecture.
Bianco S, Lupiáñez DG, Chiariello AM, Annunziatella C, Kraft K, Schöpflin R, Wittler L, Andrey G, Vingron M, Pombo A, Mundlos S, Nicodemi M. Bianco S, et al. Among authors: annunziatella c. Nat Genet. 2018 May;50(5):662-667. doi: 10.1038/s41588-018-0098-8. Epub 2018 Apr 16. Nat Genet. 2018. PMID: 29662163
Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis.
Kragesteen BK, Spielmann M, Paliou C, Heinrich V, Schöpflin R, Esposito A, Annunziatella C, Bianco S, Chiariello AM, Jerković I, Harabula I, Guckelberger P, Pechstein M, Wittler L, Chan WL, Franke M, Lupiáñez DG, Kraft K, Timmermann B, Vingron M, Visel A, Nicodemi M, Mundlos S, Andrey G. Kragesteen BK, et al. Among authors: annunziatella c. Nat Genet. 2018 Oct;50(10):1463-1473. doi: 10.1038/s41588-018-0221-x. Epub 2018 Sep 27. Nat Genet. 2018. PMID: 30262816 Free PMC article.
Preformed chromatin topology assists transcriptional robustness of Shh during limb development.
Paliou C, Guckelberger P, Schöpflin R, Heinrich V, Esposito A, Chiariello AM, Bianco S, Annunziatella C, Helmuth J, Haas S, Jerković I, Brieske N, Wittler L, Timmermann B, Nicodemi M, Vingron M, Mundlos S, Andrey G. Paliou C, et al. Among authors: annunziatella c. Proc Natl Acad Sci U S A. 2019 Jun 18;116(25):12390-12399. doi: 10.1073/pnas.1900672116. Epub 2019 May 30. Proc Natl Acad Sci U S A. 2019. PMID: 31147463 Free PMC article.
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