Pruneda JN - Search Results

1

A Chlamydia effector combining deubiquitination and acetylation activities induces Golgi fragmentation.

Pruneda JN, Bastidas RJ, Bertsoulaki E, Swatek KN, Santhanam B, Clague MJ, Valdivia RH, Urbé S, Komander D. Pruneda JN, et al. Nat Microbiol. 2018 Dec;3(12):1377-1384. doi: 10.1038/s41564-018-0271-y. Epub 2018 Nov 5. Nat Microbiol. 2018. PMID: 30397340 Free PMC article.

2

Bacterial ligases reveal fundamental principles of polyubiquitin specificity.

Franklin TG, Brzovic PS, Pruneda JN. Franklin TG, et al. Among authors: pruneda jn. Mol Cell. 2023 Dec 21;83(24):4538-4554.e4. doi: 10.1016/j.molcel.2023.11.017. Epub 2023 Dec 12. Mol Cell. 2023. PMID: 38091999 Free PMC article.

3

Septins and K63 ubiquitin chains are present in separate bacterial microdomains during autophagy of entrapped Shigella.

Lobato-Márquez D, Conesa JJ, López-Jiménez AT, Divine ME, Pruneda JN, Mostowy S. Lobato-Márquez D, et al. Among authors: pruneda jn. J Cell Sci. 2023 Apr 1;136(7):jcs261139. doi: 10.1242/jcs.261139. Epub 2023 Apr 13. J Cell Sci. 2023. PMID: 36939083 Free PMC article.

4

Bacterial mimicry of eukaryotic HECT ubiquitin ligation.

Franklin TG, Brzovic PS, Pruneda JN. Franklin TG, et al. Among authors: pruneda jn. bioRxiv [Preprint]. 2023 Jun 5:2023.06.05.543783. doi: 10.1101/2023.06.05.543783. bioRxiv. 2023. Update in: Mol Cell. 2023 Dec 21;83(24):4538-4554.e4. doi: 10.1016/j.molcel.2023.11.017 PMID: 37333152 Free PMC article. Updated. Preprint.

5

Allelic strengths of encephalopathy-associated UBA5 variants correlate between in vivo and in vitro assays.

Pan X, Alvarez AN, Ma M, Lu S, Crawford MW, Briere LC, Kanca O, Yamamoto S, Sweetser DA, Wilson JL, Napier RJ, Pruneda JN, Bellen HJ. Pan X, et al. Among authors: pruneda jn. Elife. 2023 Dec 11;12:RP89891. doi: 10.7554/eLife.89891. Elife. 2023. PMID: 38079206 Free PMC article.

6

Observing Real-Time Ubiquitination in High Throughput with Fluorescence Polarization.

Franklin TG, Pruneda JN. Franklin TG, et al. Among authors: pruneda jn. Methods Mol Biol. 2023;2581:3-12. doi: 10.1007/978-1-0716-2784-6_1. Methods Mol Biol. 2023. PMID: 36413306 Free PMC article.

7

Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis.

Wauer T, Swatek KN, Wagstaff JL, Gladkova C, Pruneda JN, Michel MA, Gersch M, Johnson CM, Freund SM, Komander D. Wauer T, et al. Among authors: pruneda jn. EMBO J. 2015 Feb 3;34(3):307-25. doi: 10.15252/embj.201489847. Epub 2014 Dec 19. EMBO J. 2015. PMID: 25527291 Free PMC article.

8

Assembly and specific recognition of k29- and k33-linked polyubiquitin.

Michel MA, Elliott PR, Swatek KN, Simicek M, Pruneda JN, Wagstaff JL, Freund SM, Komander D. Michel MA, et al. Among authors: pruneda jn. Mol Cell. 2015 Apr 2;58(1):95-109. doi: 10.1016/j.molcel.2015.01.042. Epub 2015 Mar 5. Mol Cell. 2015. PMID: 25752577 Free PMC article.

9

Development of Diubiquitin-Based FRET Probes To Quantify Ubiquitin Linkage Specificity of Deubiquitinating Enzymes.

Geurink PP, van Tol BD, van Dalen D, Brundel PJ, Mevissen TE, Pruneda JN, Elliott PR, van Tilburg GB, Komander D, Ovaa H. Geurink PP, et al. Among authors: pruneda jn. Chembiochem. 2016 May 3;17(9):816-20. doi: 10.1002/cbic.201600017. Epub 2016 Mar 21. Chembiochem. 2016. PMID: 26996281 Free PMC article.

10

A cascading activity-based probe sequentially targets E1-E2-E3 ubiquitin enzymes.

Mulder MP, Witting K, Berlin I, Pruneda JN, Wu KP, Chang JG, Merkx R, Bialas J, Groettrup M, Vertegaal AC, Schulman BA, Komander D, Neefjes J, El Oualid F, Ovaa H. Mulder MP, et al. Among authors: pruneda jn. Nat Chem Biol. 2016 Jul;12(7):523-30. doi: 10.1038/nchembio.2084. Epub 2016 May 16. Nat Chem Biol. 2016. PMID: 27182664 Free PMC article.

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