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Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots.
Givnish TJ, Zuluaga A, Spalink D, Soto Gomez M, Lam VKY, Saarela JM, Sass C, Iles WJD, de Sousa DJL, Leebens-Mack J, Chris Pires J, Zomlefer WB, Gandolfo MA, Davis JI, Stevenson DW, dePamphilis C, Specht CD, Graham SW, Barrett CF, Ané C. Givnish TJ, et al. Among authors: stevenson dw. Am J Bot. 2018 Nov;105(11):1888-1910. doi: 10.1002/ajb2.1178. Epub 2018 Oct 24. Am J Bot. 2018. PMID: 30368769 Free article.
A molecular phylogeny of Costaceae (Zingiberales).
Specht CD, Kress WJ, Stevenson DW, DeSalle R. Specht CD, et al. Among authors: stevenson dw. Mol Phylogenet Evol. 2001 Dec;21(3):333-45. doi: 10.1006/mpev.2001.1029. Mol Phylogenet Evol. 2001. PMID: 11741377
Are substitution rates and RNA editing correlated?
Cuenca A, Petersen G, Seberg O, Davis JI, Stevenson DW. Cuenca A, et al. Among authors: stevenson dw. BMC Evol Biol. 2010 Nov 11;10:349. doi: 10.1186/1471-2148-10-349. BMC Evol Biol. 2010. PMID: 21070620 Free PMC article.
A genome triplication associated with early diversification of the core eudicots.
Jiao Y, Leebens-Mack J, Ayyampalayam S, Bowers JE, McKain MR, McNeal J, Rolf M, Ruzicka DR, Wafula E, Wickett NJ, Wu X, Zhang Y, Wang J, Zhang Y, Carpenter EJ, Deyholos MK, Kutchan TM, Chanderbali AS, Soltis PS, Stevenson DW, McCombie R, Pires JC, Wong GK, Soltis DE, Depamphilis CW. Jiao Y, et al. Among authors: stevenson dw. Genome Biol. 2012 Jan 26;13(1):R3. doi: 10.1186/gb-2012-13-1-r3. Genome Biol. 2012. PMID: 22280555 Free PMC article.
Phylogeny of the Asparagales based on three plastid and two mitochondrial genes.
Seberg O, Petersen G, Davis JI, Pires JC, Stevenson DW, Chase MW, Fay MF, Devey DS, Jørgensen T, Sytsma KJ, Pillon Y. Seberg O, et al. Among authors: stevenson dw. Am J Bot. 2012 May;99(5):875-89. doi: 10.3732/ajb.1100468. Epub 2012 Apr 26. Am J Bot. 2012. PMID: 22539521 Free article.
Ontologies as integrative tools for plant science.
Walls RL, Athreya B, Cooper L, Elser J, Gandolfo MA, Jaiswal P, Mungall CJ, Preece J, Rensing S, Smith B, Stevenson DW. Walls RL, et al. Among authors: stevenson dw. Am J Bot. 2012 Aug;99(8):1263-75. doi: 10.3732/ajb.1200222. Epub 2012 Jul 30. Am J Bot. 2012. PMID: 22847540 Free PMC article.
The plant ontology as a tool for comparative plant anatomy and genomic analyses.
Cooper L, Walls RL, Elser J, Gandolfo MA, Stevenson DW, Smith B, Preece J, Athreya B, Mungall CJ, Rensing S, Hiss M, Lang D, Reski R, Berardini TZ, Li D, Huala E, Schaeffer M, Menda N, Arnaud E, Shrestha R, Yamazaki Y, Jaiswal P. Cooper L, et al. Among authors: stevenson dw. Plant Cell Physiol. 2013 Feb;54(2):e1. doi: 10.1093/pcp/pcs163. Epub 2012 Dec 5. Plant Cell Physiol. 2013. PMID: 23220694 Free PMC article.
97 results