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Bioinformatic data processing pipelines in support of next-generation sequencing-based HIV drug resistance testing: the Winnipeg Consensus.
Ji H, Enns E, Brumme CJ, Parkin N, Howison M, Lee ER, Capina R, Marinier E, Avila-Rios S, Sandstrom P, Van Domselaar G, Harrigan R, Paredes R, Kantor R, Noguera-Julian M. Ji H, et al. Among authors: harrigan r. J Int AIDS Soc. 2018 Oct;21(10):e25193. doi: 10.1002/jia2.25193. J Int AIDS Soc. 2018. PMID: 30350345 Free PMC article.
Performance comparison of next generation sequencing analysis pipelines for HIV-1 drug resistance testing.
Lee ER, Parkin N, Jennings C, Brumme CJ, Enns E, Casadellà M, Howison M, Coetzer M, Avila-Rios S, Capina R, Marinier E, Van Domselaar G, Noguera-Julian M, Kirkby D, Knaggs J, Harrigan R, Quiñones-Mateu M, Paredes R, Kantor R, Sandstrom P, Ji H. Lee ER, et al. Among authors: harrigan r. Sci Rep. 2020 Jan 31;10(1):1634. doi: 10.1038/s41598-020-58544-z. Sci Rep. 2020. PMID: 32005884 Free PMC article.
RECall for automated genotypic tropism testing.
Pou C, Bellido R, Casadellà M, Puig T, Clotet B, Harrigan R, Paredes R. Pou C, et al. Among authors: harrigan r. J Clin Microbiol. 2013 Aug;51(8):2754-7. doi: 10.1128/JCM.00935-13. Epub 2013 Jun 12. J Clin Microbiol. 2013. PMID: 23761150 Free PMC article.
Lower prevalence of drug resistance mutations at first-line virological failure to first-line therapy with atripla vs. tenofovir + emtricitabine/lamivudine + efavirenz administered on a multiple tablet therapy.
Blanco JL, Montaner JS, Marconi VC, Santoro MM, Campos-Loza AE, Shafer RW, Miller MD, Paredes R, Harrigan R, Nguyen ML, Perno CF, Gonzalez-Hernandez LA, Gatell JM. Blanco JL, et al. Among authors: harrigan r. AIDS. 2014 Nov 13;28(17):2531-9. doi: 10.1097/QAD.0000000000000424. AIDS. 2014. PMID: 25574957
254 results