Rubino F - Search Results

1

A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.).

Rinke C, Rubino F, Messer LF, Youssef N, Parks DH, Chuvochina M, Brown M, Jeffries T, Tyson GW, Seymour JR, Hugenholtz P. Rinke C, et al. Among authors: rubino f. ISME J. 2019 Mar;13(3):663-675. doi: 10.1038/s41396-018-0282-y. Epub 2018 Oct 15. ISME J. 2019. PMID: 30323263 Free PMC article.

2

Correction: A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.).

Rinke C, Rubino F, Messer LF, Youssef N, Parks DH, Chuvochina M, Brown M, Jeffries T, Tyson GW, Seymour JR, Hugenholtz P. Rinke C, et al. Among authors: rubino f. ISME J. 2020 Mar;14(3):878. doi: 10.1038/s41396-019-0556-z. ISME J. 2020. PMID: 31754204 Free PMC article.

3

A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities.

Lambert BS, Raina JB, Fernandez VI, Rinke C, Siboni N, Rubino F, Hugenholtz P, Tyson GW, Seymour JR, Stocker R. Lambert BS, et al. Among authors: rubino f. Nat Microbiol. 2017 Oct;2(10):1344-1349. doi: 10.1038/s41564-017-0010-9. Epub 2017 Aug 28. Nat Microbiol. 2017. PMID: 28848238

4

Chemotaxis shapes the microscale organization of the ocean's microbiome.

Raina JB, Lambert BS, Parks DH, Rinke C, Siboni N, Bramucci A, Ostrowski M, Signal B, Lutz A, Mendis H, Rubino F, Fernandez VI, Stocker R, Hugenholtz P, Tyson GW, Seymour JR. Raina JB, et al. Among authors: rubino f. Nature. 2022 May;605(7908):132-138. doi: 10.1038/s41586-022-04614-3. Epub 2022 Apr 20. Nature. 2022. PMID: 35444277

5

A genomic view of the reef-building coral Porites lutea and its microbial symbionts.

Robbins SJ, Singleton CM, Chan CX, Messer LF, Geers AU, Ying H, Baker A, Bell SC, Morrow KM, Ragan MA, Miller DJ, Forêt S; ReFuGe2020 Consortium; Voolstra CR, Tyson GW, Bourne DG. Robbins SJ, et al. Nat Microbiol. 2019 Dec;4(12):2090-2100. doi: 10.1038/s41564-019-0532-4. Epub 2019 Sep 23. Nat Microbiol. 2019. PMID: 31548681

6

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome.

Rubino F, Carberry C, M Waters S, Kenny D, McCabe MS, Creevey CJ. Rubino F, et al. ISME J. 2017 Apr;11(4):932-944. doi: 10.1038/ismej.2016.172. Epub 2017 Jan 13. ISME J. 2017. PMID: 28085156 Free PMC article.

7

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome.

Rubino F, Carberry C, Waters SM, Kenny D, McCabe MS, Creevey CJ. Rubino F, et al. ISME J. 2017 Jun;11(6):1510. doi: 10.1038/ismej.2017.34. ISME J. 2017. PMID: 28507336 Free PMC article. No abstract available.

8

CowPI: A Rumen Microbiome Focussed Version of the PICRUSt Functional Inference Software.

Wilkinson TJ, Huws SA, Edwards JE, Kingston-Smith AH, Siu-Ting K, Hughes M, Rubino F, Friedersdorff M, Creevey CJ. Wilkinson TJ, et al. Among authors: rubino f. Front Microbiol. 2018 May 25;9:1095. doi: 10.3389/fmicb.2018.01095. eCollection 2018. Front Microbiol. 2018. PMID: 29887853 Free PMC article.

9

Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches.

Huws SA, Edwards JE, Lin W, Rubino F, Alston M, Swarbreck D, Caim S, Stevens PR, Pachebat J, Won MY, Oyama LB, Creevey CJ, Kingston-Smith AH. Huws SA, et al. Among authors: rubino f. Microbiome. 2021 Jun 21;9(1):143. doi: 10.1186/s40168-021-01087-w. Microbiome. 2021. PMID: 34154659 Free PMC article.

10

Correction to: Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches.

Huws SA, Edwards JE, Lin W, Rubino F, Alston M, Swarbreck D, Caim S, Stevens PR, Pachebat J, Won MY, Oyama LB, Creevey CJ, Kingston-Smith AH. Huws SA, et al. Among authors: rubino f. Microbiome. 2021 Aug 10;9(1):168. doi: 10.1186/s40168-021-01122-w. Microbiome. 2021. PMID: 34376250 Free PMC article. No abstract available.

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