Liu P - Search Results

1

MetaOmics: analysis pipeline and browser-based software suite for transcriptomic meta-analysis.

Ma T, Huo Z, Kuo A, Zhu L, Fang Z, Zeng X, Lin CW, Liu S, Wang L, Liu P, Rahman T, Chang LC, Kim S, Li J, Park Y, Song C, Oesterreich S, Sibille E, Tseng GC. Ma T, et al. Among authors: liu s, liu p. Bioinformatics. 2019 May 1;35(9):1597-1599. doi: 10.1093/bioinformatics/bty825. Bioinformatics. 2019. PMID: 30304367 Free PMC article.

2

Diagnosis of T-cell-mediated kidney rejection in formalin-fixed, paraffin-embedded tissues using RNA-Seq-based machine learning algorithms.

Liu P, Tseng G, Wang Z, Huang Y, Randhawa P. Liu P, et al. Hum Pathol. 2019 Feb;84:283-290. doi: 10.1016/j.humpath.2018.09.013. Epub 2018 Oct 6. Hum Pathol. 2019. PMID: 30296518

3

MethylSeqDesign: a framework for Methyl-Seq genome-wide power calculation and study design issues.

Liu P, Lin CW, Park Y, Tseng G. Liu P, et al. Biostatistics. 2021 Jan 28;22(1):35-50. doi: 10.1093/biostatistics/kxz016. Biostatistics. 2021. PMID: 31107532 Free PMC article.

4

Quantitative Proteomics for Monitoring Renal Transplant Injury.

Song L, Fang F, Liu P, Zeng G, Liu H, Zhao Y, Xie X, Tseng G, Randhawa P, Xiao K. Song L, et al. Among authors: liu h, liu p. Proteomics Clin Appl. 2020 Jul;14(4):e1900036. doi: 10.1002/prca.201900036. Epub 2020 Feb 16. Proteomics Clin Appl. 2020. PMID: 31999393

5

Recent Advances in Computer-Assisted Algorithms for Cell Subtype Identification of Cytometry Data.

Liu P, Liu S, Fang Y, Xue X, Zou J, Tseng G, Konnikova L. Liu P, et al. Among authors: liu s. Front Cell Dev Biol. 2020 Apr 28;8:234. doi: 10.3389/fcell.2020.00234. eCollection 2020. Front Cell Dev Biol. 2020. PMID: 32411698 Free PMC article. Review.

6

Unpaired data empowers association tests.

Gong M, Liu P, Sciurba FC, Stojanov P, Tao D, Tseng GC, Zhang K, Batmanghelich K. Gong M, et al. Among authors: liu p. Bioinformatics. 2021 May 5;37(6):785-792. doi: 10.1093/bioinformatics/btaa886. Bioinformatics. 2021. PMID: 33070196 Free PMC article.

7

RNASeqDesign: A framework for RNA-Seq genome-wide power calculation and study design issues.

Lin CW, Liao SG, Liu P, Park YS, Lee MT, Tseng GC. Lin CW, et al. Among authors: liu p. J R Stat Soc Ser C Appl Stat. 2019 Apr;68(3):683-704. doi: 10.1111/rssc.12330. Epub 2018 Dec 9. J R Stat Soc Ser C Appl Stat. 2019. PMID: 33692596 Free PMC article.

8

Transcriptome and Exome Analyses of Hepatocellular Carcinoma Reveal Patterns to Predict Cancer Recurrence in Liver Transplant Patients.

Liu S, Nalesnik MA, Singhi A, Wood-Trageser MA, Randhawa P, Ren BG, Humar A, Liu P, Yu YP, Tseng GC, Michalopoulos G, Luo JH. Liu S, et al. Among authors: liu p. Hepatol Commun. 2022 Apr;6(4):710-727. doi: 10.1002/hep4.1846. Epub 2021 Nov 1. Hepatol Commun. 2022. PMID: 34725972 Free PMC article.

9

Diagnosis of T-cell-mediated kidney rejection by biopsy-based proteomic biomarkers and machine learning.

Fang F, Liu P, Song L, Wagner P, Bartlett D, Ma L, Li X, Rahimian MA, Tseng G, Randhawa P, Xiao K. Fang F, et al. Among authors: liu p. Front Immunol. 2023 Feb 6;14:1090373. doi: 10.3389/fimmu.2023.1090373. eCollection 2023. Front Immunol. 2023. PMID: 36814924 Free PMC article.

10

Adaptively Integrative Association between Multivariate Phenotypes and Transcriptomic Data for Complex Diseases.

Li Y, Fang Y, Chang HC, Gorczyca M, Liu P, Tseng GC. Li Y, et al. Among authors: liu p. Genes (Basel). 2023 Mar 26;14(4):798. doi: 10.3390/genes14040798. Genes (Basel). 2023. PMID: 37107556 Free PMC article.

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