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A universal SNP and small-indel variant caller using deep neural networks.
Poplin R, Chang PC, Alexander D, Schwartz S, Colthurst T, Ku A, Newburger D, Dijamco J, Nguyen N, Afshar PT, Gross SS, Dorfman L, McLean CY, DePristo MA. Poplin R, et al. Among authors: alexander d. Nat Biotechnol. 2018 Nov;36(10):983-987. doi: 10.1038/nbt.4235. Epub 2018 Sep 24. Nat Biotechnol. 2018. PMID: 30247488
Stability selection for genome-wide association.
Alexander DH, Lange K. Alexander DH, et al. Genet Epidemiol. 2011 Nov;35(7):722-8. doi: 10.1002/gepi.20623. Epub 2011 Aug 26. Genet Epidemiol. 2011. PMID: 22009793
Efficient analysis of large datasets and sex bias with ADMIXTURE.
Shringarpure SS, Bustamante CD, Lange K, Alexander DH. Shringarpure SS, et al. Among authors: alexander dh. BMC Bioinformatics. 2016 May 23;17:218. doi: 10.1186/s12859-016-1082-x. BMC Bioinformatics. 2016. PMID: 27216439 Free PMC article.
Biomarkers.
Thompson E, Schroder A, He T, Legouhy A, Zhao X, Cole JH, Oxtoby NP, Alexander DC; Alzheimer’s Disease Neuroimaging Initiative. Thompson E, et al. Among authors: alexander dc. Alzheimers Dement. 2024 Dec;20 Suppl 2:e088763. doi: 10.1002/alz.088763. Alzheimers Dement. 2024. PMID: 39786017
Developing Topics.
Soskic S, Thompson E, He T, Schroder A, Oxtoby NP, Alexander DC. Soskic S, et al. Among authors: alexander dc. Alzheimers Dement. 2024 Dec;20 Suppl 8:e095454. doi: 10.1002/alz.095454. Alzheimers Dement. 2024. PMID: 39783330
2,144 results