Hassani-Pak K - Search Results

1

Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach.

Brandizi M, Singh A, Rawlings C, Hassani-Pak K. Brandizi M, et al. J Integr Bioinform. 2018 Aug 7;15(3):20180023. doi: 10.1515/jib-2018-0023. J Integr Bioinform. 2018. PMID: 30085931 Free PMC article.

2

Graph-based sequence annotation using a data integration approach.

Pesch R, Lysenko A, Hindle M, Hassani-Pak K, Thiele R, Rawlings C, Köhler J, Taubert J. Pesch R, et al. J Integr Bioinform. 2008 Aug 25;5(2). doi: 10.2390/biecoll-jib-2008-94. J Integr Bioinform. 2008. PMID: 20134069

3

Enhancing data integration with text analysis to find proteins implicated in plant stress response.

Hassani-Pak K, Legaie R, Canevet C, van den Berg HA, Moore JD, Rawlings CJ. Hassani-Pak K, et al. J Integr Bioinform. 2010 Mar 25;7(3). doi: 10.2390/biecoll-jib-2010-121. J Integr Bioinform. 2010. PMID: 20375451 Free article.

4

Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis.

Lysenko A, Defoin-Platel M, Hassani-Pak K, Taubert J, Hodgman C, Rawlings CJ, Saqi M. Lysenko A, et al. BMC Bioinformatics. 2011 May 25;12:203. doi: 10.1186/1471-2105-12-203. BMC Bioinformatics. 2011. PMID: 21612636 Free PMC article.

5

Ondex Web: web-based visualization and exploration of heterogeneous biological networks.

Taubert J, Hassani-Pak K, Castells-Brooke N, Rawlings CJ. Taubert J, et al. Bioinformatics. 2014 Apr 1;30(7):1034-5. doi: 10.1093/bioinformatics/btt740. Epub 2013 Dec 20. Bioinformatics. 2014. PMID: 24363379 Free PMC article.

6

A query suggestion workflow for life science IR-systems.

Esch M, Chen J, Weise S, Hassani-Pak K, Scholz U, Lange M. Esch M, et al. J Integr Bioinform. 2014 Jun 13;11(2):237. doi: 10.2390/biecoll-jib-2014-237. J Integr Bioinform. 2014. PMID: 24953306

7

Developing integrated crop knowledge networks to advance candidate gene discovery.

Hassani-Pak K, Castellote M, Esch M, Hindle M, Lysenko A, Taubert J, Rawlings C. Hassani-Pak K, et al. Appl Transl Genom. 2016 Nov 2;11:18-26. doi: 10.1016/j.atg.2016.10.003. eCollection 2016 Dec. Appl Transl Genom. 2016. PMID: 28018846 Free PMC article.

8

Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes.

Hassani-Pak K, Rawlings C. Hassani-Pak K, et al. J Integr Bioinform. 2017 Jun 13;14(1):20160002. doi: 10.1515/jib-2016-0002. J Integr Bioinform. 2017. PMID: 28609292 Free PMC article. Review.

9

KnetMaps: a BioJS component to visualize biological knowledge networks.

Singh A, Rawlings CJ, Hassani-Pak K. Singh A, et al. F1000Res. 2018 Oct 17;7:1651. doi: 10.12688/f1000research.16605.1. eCollection 2018. F1000Res. 2018. PMID: 30755790 Free PMC article.

10

The Wheat GENIE3 Network Provides Biologically-Relevant Information in Polyploid Wheat.

Harrington SA, Backhaus AE, Singh A, Hassani-Pak K, Uauy C. Harrington SA, et al. Among authors: hassani pak k. G3 (Bethesda). 2020 Oct 5;10(10):3675-3686. doi: 10.1534/g3.120.401436. G3 (Bethesda). 2020. PMID: 32747342 Free PMC article.

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