Alneberg J - Search Results

1

BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.

Alneberg J, Sundh J, Bennke C, Beier S, Lundin D, Hugerth LW, Pinhassi J, Kisand V, Riemann L, Jürgens K, Labrenz M, Andersson AF. Alneberg J, et al. Sci Data. 2018 Jul 31;5:180146. doi: 10.1038/sdata.2018.146. Sci Data. 2018. PMID: 30063227 Free PMC article.

2

Metagenome-assembled genomes uncover a global brackish microbiome.

Hugerth LW, Larsson J, Alneberg J, Lindh MV, Legrand C, Pinhassi J, Andersson AF. Hugerth LW, et al. Among authors: alneberg j. Genome Biol. 2015 Dec 14;16:279. doi: 10.1186/s13059-015-0834-7. Genome Biol. 2015. PMID: 26667648 Free PMC article.

3

Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes.

Alneberg J, Bennke C, Beier S, Bunse C, Quince C, Ininbergs K, Riemann L, Ekman M, Jürgens K, Labrenz M, Pinhassi J, Andersson AF. Alneberg J, et al. Commun Biol. 2020 Mar 13;3(1):119. doi: 10.1038/s42003-020-0856-x. Commun Biol. 2020. PMID: 32170201 Free PMC article.

4

Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change.

Markussen T, Happel EM, Teikari JE, Huchaiah V, Alneberg J, Andersson AF, Sivonen K, Riemann L, Middelboe M, Kisand V. Markussen T, et al. Among authors: alneberg j. Environ Microbiol. 2018 Aug;20(8):3083-3099. doi: 10.1111/1462-2920.14371. Epub 2018 Sep 19. Environ Microbiol. 2018. PMID: 30084235

5

Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes.

Alneberg J, Karlsson CMG, Divne AM, Bergin C, Homa F, Lindh MV, Hugerth LW, Ettema TJG, Bertilsson S, Andersson AF, Pinhassi J. Alneberg J, et al. Microbiome. 2018 Sep 28;6(1):173. doi: 10.1186/s40168-018-0550-0. Microbiome. 2018. PMID: 30266101 Free PMC article.

6

Effects of allochthonous dissolved organic matter input on microbial composition and nitrogen-cycling genes at two contrasting estuarine sites.

Happel EM, Markussen T, Teikari JE, Huchaiah V, Alneberg J, Andersson AF, Sivonen K, Middelboe M, Kisand V, Riemann L. Happel EM, et al. Among authors: alneberg j. FEMS Microbiol Ecol. 2019 Sep 1;95(9):fiz123. doi: 10.1093/femsec/fiz123. FEMS Microbiol Ecol. 2019. PMID: 31397876

7

AFISsys - An autonomous instrument for the preservation of brackish water samples for microbial metatranscriptome analysis.

Charvet S, Riemann L, Alneberg J, Andersson AF, von Borries J, Fischer U, Labrenz M. Charvet S, et al. Among authors: alneberg j. Water Res. 2019 Feb 1;149:351-361. doi: 10.1016/j.watres.2018.11.017. Epub 2018 Nov 12. Water Res. 2019. PMID: 30469021

8

Ecologically coherent population structure of uncultivated bacterioplankton.

Sjöqvist C, Delgado LF, Alneberg J, Andersson AF. Sjöqvist C, et al. Among authors: alneberg j. ISME J. 2021 Oct;15(10):3034-3049. doi: 10.1038/s41396-021-00985-z. Epub 2021 May 5. ISME J. 2021. PMID: 33953362 Free PMC article.

9

Machine Learning Predicts the Presence of 2,4,6-Trinitrotoluene in Sediments of a Baltic Sea Munitions Dumpsite Using Microbial Community Compositions.

Janßen R, Beck AJ, Werner J, Dellwig O, Alneberg J, Kreikemeyer B, Maser E, Böttcher C, Achterberg EP, Andersson AF, Labrenz M. Janßen R, et al. Among authors: alneberg j. Front Microbiol. 2021 Sep 29;12:626048. doi: 10.3389/fmicb.2021.626048. eCollection 2021. Front Microbiol. 2021. PMID: 34659134 Free PMC article.

10

Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems.

Hu YOO, Ndegwa N, Alneberg J, Johansson S, Logue JB, Huss M, Käller M, Lundeberg J, Fagerberg J, Andersson AF. Hu YOO, et al. Among authors: alneberg j. Sci Rep. 2018 Aug 9;8(1):11907. doi: 10.1038/s41598-018-29920-7. Sci Rep. 2018. PMID: 30093614 Free PMC article.

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