Miecznikowski JC - Search Results

1

The salivary microbiome of diabetic and non-diabetic adults with periodontal disease.

Sabharwal A, Ganley K, Miecznikowski JC, Haase EM, Barnes V, Scannapieco FA. Sabharwal A, et al. Among authors: miecznikowski jc. J Periodontol. 2019 Jan;90(1):26-34. doi: 10.1002/JPER.18-0167. Epub 2018 Sep 5. J Periodontol. 2019. PMID: 29999529

2

Dynamics of the Streptococcus gordonii Transcriptome in Response to Medium, Salivary α-Amylase, and Starch.

Haase EM, Feng X, Pan J, Miecznikowski JC, Scannapieco FA. Haase EM, et al. Among authors: miecznikowski jc. Appl Environ Microbiol. 2015 Aug 15;81(16):5363-74. doi: 10.1128/AEM.01221-15. Epub 2015 May 29. Appl Environ Microbiol. 2015. PMID: 26025889 Free PMC article.

3

Salivary inflammatory markers and microbiome in normoglycemic lean and obese children compared to obese children with type 2 diabetes.

Janem WF, Scannapieco FA, Sabharwal A, Tsompana M, Berman HA, Haase EM, Miecznikowski JC, Mastrandrea LD. Janem WF, et al. Among authors: miecznikowski jc. PLoS One. 2017 Mar 2;12(3):e0172647. doi: 10.1371/journal.pone.0172647. eCollection 2017. PLoS One. 2017. PMID: 28253297 Free PMC article.

4

Correction: Salivary inflammatory markers and microbiome in normoglycemic lean and obese children compared to obese children with type 2 diabetes.

Janem WF, Scannapieco FA, Sabharwal A, Tsompana M, Berman HA, Haase EM, Miecznikowski JC, Mastrandrea LD. Janem WF, et al. Among authors: miecznikowski jc. PLoS One. 2017 Aug 16;12(8):e0183600. doi: 10.1371/journal.pone.0183600. eCollection 2017. PLoS One. 2017. PMID: 28813516 Free PMC article.

5

Identifying Pneumonia Subtypes from Electronic Health Records Using Rule-Based Algorithms.

Hegde H, Glurich I, Panny A, Vedre JG, VanWormer JJ, Berg R, Scannapieco FA, Miecznikowski J, Acharya A. Hegde H, et al. Methods Inf Med. 2022 May;61(1-02):29-37. doi: 10.1055/a-1801-2718. Epub 2022 Mar 17. Methods Inf Med. 2022. PMID: 35299265 Free PMC article.

6

A Methodological Approach to Validate Pneumonia Encounters from Radiology Reports Using Natural Language Processing.

Panny A, Hegde H, Glurich I, Scannapieco FA, Vedre JG, VanWormer JJ, Miecznikowski J, Acharya A. Panny A, et al. Methods Inf Med. 2022 May;61(1-02):38-45. doi: 10.1055/a-1817-7008. Epub 2022 Apr 5. Methods Inf Med. 2022. PMID: 35381617 Free PMC article.

7

Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset.

Zhu Q, Miecznikowski JC, Halfon MS. Zhu Q, et al. Among authors: miecznikowski jc. BMC Bioinformatics. 2010 May 27;11:285. doi: 10.1186/1471-2105-11-285. BMC Bioinformatics. 2010. PMID: 20507584 Free PMC article.

8

FUSIM: a software tool for simulating fusion transcripts.

Bruno AE, Miecznikowski JC, Qin M, Wang J, Liu S. Bruno AE, et al. Among authors: miecznikowski jc. BMC Bioinformatics. 2013 Jan 16;14:13. doi: 10.1186/1471-2105-14-13. BMC Bioinformatics. 2013. PMID: 23323884 Free PMC article.

9

SuMO-Fil: Supervised multi-omic filtering prior to performing network analysis.

Towle-Miller LM, Miecznikowski JC, Zhang F, Tritchler DL. Towle-Miller LM, et al. Among authors: miecznikowski jc. PLoS One. 2021 Aug 3;16(8):e0255579. doi: 10.1371/journal.pone.0255579. eCollection 2021. PLoS One. 2021. PMID: 34343218 Free PMC article.

10

Comparative survival analysis of breast cancer microarray studies identifies important prognostic genetic pathways.

Miecznikowski JC, Wang D, Liu S, Sucheston L, Gold D. Miecznikowski JC, et al. BMC Cancer. 2010 Oct 21;10:573. doi: 10.1186/1471-2407-10-573. BMC Cancer. 2010. PMID: 20964848 Free PMC article.

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