Depledge DP - Search Results

1

High Viral Diversity and Mixed Infections in Cerebral Spinal Fluid From Cases of Varicella Zoster Virus Encephalitis.

Depledge DP, Cudini J, Kundu S, Atkinson C, Brown JR, Haque T, Houldcroft CJ, Koay ES, McGill F, Milne R, Whitfield T, Tang JW, Underhill G, Bergstrom T, Norberg P, Goldstein R, Solomon T, Breuer J. Depledge DP, et al. J Infect Dis. 2018 Oct 5;218(10):1592-1601. doi: 10.1093/infdis/jiy358. J Infect Dis. 2018. PMID: 29986093 Free PMC article.

2

Specific capture and whole-genome sequencing of viruses from clinical samples.

Depledge DP, Palser AL, Watson SJ, Lai IY, Gray ER, Grant P, Kanda RK, Leproust E, Kellam P, Breuer J. Depledge DP, et al. PLoS One. 2011;6(11):e27805. doi: 10.1371/journal.pone.0027805. Epub 2011 Nov 18. PLoS One. 2011. PMID: 22125625 Free PMC article.

3

Viral population analysis and minority-variant detection using short read next-generation sequencing.

Watson SJ, Welkers MR, Depledge DP, Coulter E, Breuer JM, de Jong MD, Kellam P. Watson SJ, et al. Among authors: depledge dp. Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120205. doi: 10.1098/rstb.2012.0205. Print 2013 Mar 19. Philos Trans R Soc Lond B Biol Sci. 2013. PMID: 23382427 Free PMC article.

4

Next-generation whole genome sequencing identifies the direction of norovirus transmission in linked patients.

Kundu S, Lockwood J, Depledge DP, Chaudhry Y, Aston A, Rao K, Hartley JC, Goodfellow I, Breuer J. Kundu S, et al. Among authors: depledge dp. Clin Infect Dis. 2013 Aug;57(3):407-14. doi: 10.1093/cid/cit287. Epub 2013 May 3. Clin Infect Dis. 2013. PMID: 23645848 Free PMC article.

5

Mode of virus rescue determines the acquisition of VHS mutations in VP22-negative herpes simplex virus 1.

Ebert K, Depledge DP, Breuer J, Harman L, Elliott G. Ebert K, et al. Among authors: depledge dp. J Virol. 2013 Sep;87(18):10389-93. doi: 10.1128/JVI.01654-13. Epub 2013 Jul 17. J Virol. 2013. PMID: 23864617 Free PMC article.

6

Deep sequencing of viral genomes provides insight into the evolution and pathogenesis of varicella zoster virus and its vaccine in humans.

Depledge DP, Kundu S, Jensen NJ, Gray ER, Jones M, Steinberg S, Gershon A, Kinchington PR, Schmid DS, Balloux F, Nichols RA, Breuer J. Depledge DP, et al. Mol Biol Evol. 2014 Feb;31(2):397-409. doi: 10.1093/molbev/mst210. Epub 2013 Oct 25. Mol Biol Evol. 2014. PMID: 24162921 Free PMC article.

7

Evolution of cocirculating varicella-zoster virus genotypes during a chickenpox outbreak in Guinea-Bissau.

Depledge DP, Gray ER, Kundu S, Cooray S, Poulsen A, Aaby P, Breuer J. Depledge DP, et al. J Virol. 2014 Dec;88(24):13936-46. doi: 10.1128/JVI.02337-14. Epub 2014 Oct 1. J Virol. 2014. PMID: 25275123 Free PMC article.

8

Whole-genome enrichment and sequencing of Chlamydia trachomatis directly from clinical samples.

Christiansen MT, Brown AC, Kundu S, Tutill HJ, Williams R, Brown JR, Holdstock J, Holland MJ, Stevenson S, Dave J, Tong CY, Einer-Jensen K, Depledge DP, Breuer J. Christiansen MT, et al. Among authors: depledge dp. BMC Infect Dis. 2014 Nov 12;14:591. doi: 10.1186/s12879-014-0591-3. BMC Infect Dis. 2014. PMID: 25388670 Free PMC article.

9

Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology.

Weinert LA, Depledge DP, Kundu S, Gershon AA, Nichols RA, Balloux F, Welch JJ, Breuer J. Weinert LA, et al. Among authors: depledge dp. Mol Biol Evol. 2015 Apr;32(4):1020-8. doi: 10.1093/molbev/msu406. Epub 2015 Jan 6. Mol Biol Evol. 2015. PMID: 25568346 Free PMC article.

10

Complete Genome Sequence of the Human Herpesvirus 6A Strain AJ from Africa Resembles Strain GS from North America.

Tweedy J, Spyrou MA, Donaldson CD, Depledge D, Breuer J, Gompels UA. Tweedy J, et al. Genome Announc. 2015 Feb 12;3(1):e01498-14. doi: 10.1128/genomeA.01498-14. Genome Announc. 2015. PMID: 25676750 Free PMC article.

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