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ASaiM: a Galaxy-based framework to analyze microbiota data.
Batut B, Gravouil K, Defois C, Hiltemann S, Brugère JF, Peyretaillade E, Peyret P. Batut B, et al. Among authors: brugere jf. Gigascience. 2018 Jun 1;7(6):giy057. doi: 10.1093/gigascience/giy057. Gigascience. 2018. PMID: 29790941 Free PMC article.
The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level.
Tottey W, Denonfoux J, Jaziri F, Parisot N, Missaoui M, Hill D, Borrel G, Peyretaillade E, Alric M, Harris HM, Jeffery IB, Claesson MJ, O'Toole PW, Peyret P, Brugère JF. Tottey W, et al. Among authors: brugere jf. PLoS One. 2013 May 17;8(5):e62544. doi: 10.1371/journal.pone.0062544. Print 2013. PLoS One. 2013. PMID: 23690942 Free PMC article.
Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces.
Borrel G, Harris HM, Parisot N, Gaci N, Tottey W, Mihajlovski A, Deane J, Gribaldo S, Bardot O, Peyretaillade E, Peyret P, O'Toole PW, Brugère JF. Borrel G, et al. Among authors: brugere jf. Genome Announc. 2013 Jul 11;1(4):e00453-13. doi: 10.1128/genomeA.00453-13. Genome Announc. 2013. PMID: 23846268 Free PMC article.
PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.
Jaziri F, Parisot N, Abid A, Denonfoux J, Ribière C, Gasc C, Boucher D, Brugère JF, Mahul A, Hill DR, Peyretaillade E, Peyret P. Jaziri F, et al. Among authors: brugere jf. Database (Oxford). 2014 Apr 26;2014(0):bau036. doi: 10.1093/database/bau036. Print 2014. Database (Oxford). 2014. PMID: 24771669 Free PMC article.
Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine.
Borrel G, Parisot N, Harris HM, Peyretaillade E, Gaci N, Tottey W, Bardot O, Raymann K, Gribaldo S, Peyret P, O'Toole PW, Brugère JF. Borrel G, et al. Among authors: brugere jf. BMC Genomics. 2014 Aug 13;15:679. doi: 10.1186/1471-2164-15-679. BMC Genomics. 2014. PMID: 25124552 Free PMC article.
40 results