Vlachakis D - Search Results

1

Genomic big data hitting the storage bottleneck.

Papageorgiou L, Eleni P, Raftopoulou S, Mantaiou M, Megalooikonomou V, Vlachakis D. Papageorgiou L, et al. Among authors: vlachakis d. EMBnet J. 2018;24:e910. Epub 2018 Apr 19. EMBnet J. 2018. PMID: 29782620 Free PMC article.

2

Introducing Drugster: a comprehensive and fully integrated drug design, lead and structure optimization toolkit.

Vlachakis D, Tsagrasoulis D, Megalooikonomou V, Kossida S. Vlachakis D, et al. Bioinformatics. 2013 Jan 1;29(1):126-8. doi: 10.1093/bioinformatics/bts637. Epub 2012 Oct 25. Bioinformatics. 2013. PMID: 23104887

3

IMGT/Collier-de-Perles: a two-dimensional visualization tool for amino acid domain sequences.

Vlachakis D, Feidakis C, Megalooikonomou V, Kossida S. Vlachakis D, et al. Theor Biol Med Model. 2013 Feb 21;10:14. doi: 10.1186/1742-4682-10-14. Theor Biol Med Model. 2013. PMID: 23432825 Free PMC article.

4

Protein signatures using electrostatic molecular surfaces in harmonic space.

Carvalho CS, Vlachakis D, Tsiliki G, Megalooikonomou V, Kossida S. Carvalho CS, et al. Among authors: vlachakis d. PeerJ. 2013 Oct 22;1:e185. doi: 10.7717/peerj.185. eCollection 2013. PeerJ. 2013. PMID: 24167780 Free PMC article.

5

Structural models for the design of novel antiviral agents against Greek Goat Encephalitis.

Papageorgiou L, Loukatou S, Koumandou VL, Makałowski W, Megalooikonomou V, Vlachakis D, Kossida S. Papageorgiou L, et al. Among authors: vlachakis d. PeerJ. 2014 Nov 6;2:e664. doi: 10.7717/peerj.664. eCollection 2014. PeerJ. 2014. PMID: 25392762 Free PMC article.

6

DrugOn: a fully integrated pharmacophore modeling and structure optimization toolkit.

Vlachakis D, Fakourelis P, Megalooikonomou V, Makris C, Kossida S. Vlachakis D, et al. PeerJ. 2015 Jan 13;3:e725. doi: 10.7717/peerj.725. eCollection 2015. PeerJ. 2015. PMID: 25648563 Free PMC article.

7

Antibodies as stratagems against cancer.

Papageorgiou L, Cuong NT, Vlachakis D. Papageorgiou L, et al. Among authors: vlachakis d. Mol Biosyst. 2016 Jun 21;12(7):2047-55. doi: 10.1039/c5mb00699f. Mol Biosyst. 2016. PMID: 26738941 Review.

8

An updated evolutionary study of Flaviviridae NS3 helicase and NS5 RNA-dependent RNA polymerase reveals novel invariable motifs as potential pharmacological targets.

Papageorgiou L, Loukatou S, Sofia K, Maroulis D, Vlachakis D. Papageorgiou L, et al. Among authors: vlachakis d. Mol Biosyst. 2016 Jun 21;12(7):2080-93. doi: 10.1039/c5mb00706b. Mol Biosyst. 2016. PMID: 26864387

9

3D structural analysis of proteins using electrostatic surfaces based on image segmentation.

Vlachakis D, Champeris Tsaniras S, Tsiliki G, Megalooikonomou V, Kossida S. Vlachakis D, et al. J Mol Biochem. 2014;3(1):27-33. Epub 2014 Feb 28. J Mol Biochem. 2014. PMID: 27525250 Free PMC article.

10

Molecular dynamics simulations through GPU video games technologies.

Loukatou S, Papageorgiou L, Fakourelis P, Filntisi A, Polychronidou E, Bassis I, Megalooikonomou V, Makałowski W, Vlachakis D, Kossida S. Loukatou S, et al. Among authors: vlachakis d. J Mol Biochem. 2014;3(2):64-71. Epub 2014 Jun 30. J Mol Biochem. 2014. PMID: 27525251 Free PMC article.

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